Cow genome map
Conread name: | Ss1.1-Pig1-122O09.5 |
Conread position: | 1-347 |
Cow position: | chr10:54126949-54127275 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 1-441 |
Cow position: | chr10:25497850-25498261 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 95 |
Conread position: | 2-441 |
Cow position: | chr10:29695732-29696151 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 306 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 76, 130 |
Conread position: | 2-441 |
Cow position: | chr10:62216103-62216516 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 11-441 |
Cow position: | chr10:8289465-8289893 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 73 |
Conread position: | 15-276 |
Cow position: | chr10:37040590-37040832 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 184 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-401 |
Cow position: | chr10:46190877-46191244 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 262 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 149, 80 |
Conread position: | 15-402 |
Cow position: | chr10:61296797-61297201 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 232 |
Conread position: | 15-429 |
Cow position: | chr10:38345873-38345465 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 397, 64 |
Conread position: | 15-435 |
Cow position: | chr10:281153-280716 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 401 |
Conread position: | 15-441 |
Cow position: | chr10:7283179-7282773 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr10:10581156-10581583 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 104 |
Conread position: | 15-441 |
Cow position: | chr10:19511114-19511515 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr10:21486419-21486826 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 15-441 |
Cow position: | chr10:24299353-24298942 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 283 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 179, 80 |
Conread position: | 15-441 |
Cow position: | chr10:29847117-29846700 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 58 |
Conread position: | 15-441 |
Cow position: | chr10:32650241-32650642 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 15-441 |
Cow position: | chr10:37060430-37060839 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr10:37769326-37769732 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr10:38538990-38538588 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr10:57990462-57990054 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 15-441 |
Cow position: | chr10:60489158-60489572 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 83 |
Conread position: | 18-303 |
Cow position: | chr10:19497443-19497140 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 202 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 18-401 |
Cow position: | chr10:4192743-4192342 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 18-401 |
Cow position: | chr10:4499215-4499578 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 253 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 18-441 |
Cow position: | chr10:14803308-14803744 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 292 |
Conread position: | 18-441 |
Cow position: | chr10:19839645-19840062 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 276 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 104, 66 |
Conread position: | 18-441 |
Cow position: | chr10:21741279-21740842 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 218 |
Conread position: | 18-441 |
Cow position: | chr10:39179263-39179693 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 294 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 70, 289 |
Conread position: | 18-441 |
Cow position: | chr10:39817873-39817440 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 156 |
Conread position: | 18-441 |
Cow position: | chr10:41876393-41876828 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 227 |
Conread position: | 18-441 |
Cow position: | chr10:47906252-47906687 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 250 |
Conread position: | 19-388 |
Cow position: | chr10:21466726-21467112 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 260 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 19-433 |
Cow position: | chr10:19143835-19143436 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 65 |
Conread position: | 19-441 |
Cow position: | chr10:22100747-22101151 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 19-441 |
Cow position: | chr10:32577772-32578213 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 19-441 |
Cow position: | chr10:41156927-41157357 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 317 |
Conread position: | 19-441 |
Cow position: | chr10:51953131-51952696 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 162 |
Conread position: | 19-441 |
Cow position: | chr10:62409347-62408942 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 20-441 |
Cow position: | chr10:21401193-21400762 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 152 |
Conread position: | 22-441 |
Cow position: | chr10:11686181-11685758 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 287 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 71, 306 |
Conread position: | 22-446 |
Cow position: | chr10:39041798-39041390 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 38-400 |
Cow position: | chr10:38546698-38546354 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 84-441 |
Cow position: | chr10:41566665-41567016 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 245 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 236, 73 |
Conread position: | 88-441 |
Cow position: | chr10:55092671-55093020 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 240 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 100, 71 |
Conread position: | 93-305 |
Cow position: | chr10:42736072-42736281 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 153 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 9, 81 |
Conread position: | 98-317 |
Cow position: | chr10:28641056-28641276 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 147 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 98-441 |
Cow position: | chr10:57559980-57559639 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 300, 221 |
Conread position: | 104-389 |
Cow position: | chr10:19715471-19715188 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 107-441 |
Cow position: | chr10:123894-124219 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 214 |
Conread position: | 107-441 |
Cow position: | chr10:1375113-1375446 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 107-456 |
Cow position: | chr10:42109310-42109657 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 219 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 276, 109 |
Conread position: | 107-456 |
Cow position: | chr10:42747679-42748026 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 219 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 275, 177 |
Conread position: | 110-441 |
Cow position: | chr10:14859567-14859887 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 218 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 122-401 |
Cow position: | chr10:34318662-34318393 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 187 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 122-402 |
Cow position: | chr10:28116843-28116553 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 196 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 40, 32 |
Conread position: | 128-341 |
Cow position: | chr10:183141-183353 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 145 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 103, 95 |
Conread position: | 129-400 |
Cow position: | chr10:38846978-38847242 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 185 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 161, 28 |
Conread position: | 139-400 |
Cow position: | chr10:58377952-58377703 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 174 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 141-441 |
Cow position: | chr10:54059736-54059445 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 209 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 67, 35 |
Conread position: | 142-313 |
Cow position: | chr10:2123500-2123329 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 130 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 144-441 |
Cow position: | chr10:29633245-29632951 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 211 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 9, 15 |
Conread position: | 151-435 |
Cow position: | chr10:32063770-32064056 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 195 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 22, 11 |
Conread position: | 162-399 |
Cow position: | chr10:31523488-31523707 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 174 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 165-411 |
Cow position: | chr10:15862656-15862417 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 168 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 166, 50 |
Conread position: | 168-434 |
Cow position: | chr10:62777978-62778248 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 168-441 |
Cow position: | chr10:34685532-34685805 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 143 |
Conread position: | 170-441 |
Cow position: | chr10:25565600-25565336 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 185 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 176-332 |
Cow position: | chr10:1938196-1938037 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 120 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 176-441 |
Cow position: | chr10:276238-276503 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 141 |
Conread position: | 181-400 |
Cow position: | chr10:58596156-58596373 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 158 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 13, 62 |
Conread position: | 188-436 |
Cow position: | chr10:10478473-10478239 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 173 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 189-441 |
Cow position: | chr10:25359060-25359309 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 186 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 189-441 |
Cow position: | chr10:49310198-49310446 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 179 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 76, 36 |
Conread position: | 203-447 |
Cow position: | chr10:42628347-42628576 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 175 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 267-434 |
Cow position: | chr10:50018322-50018156 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 40, 120 |
Show alignments to all cow chromosomes.