Cow genome map

Conread name: Ss1.1-Pig1-122O09.5

Conread position: 1-430
Cow position:
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 94

Conread position: 2-173
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 2-252
Cow position:
Alignm length: 253
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 232, 83

Conread position: 2-316
Cow position:
Alignm length: 315
Alignm identity: 207
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 92, 0

Conread position: 2-435
Cow position:
Alignm length: 435
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 92

Conread position: 4-378
Cow position:
Alignm length: 375
Alignm identity: 254
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 11, 0

Conread position: 11-441
Cow position:
Alignm length: 439
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 308

Conread position: 12-402
Cow position:
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 15-298
Cow position:
Alignm length: 292
Alignm identity: 202
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 212, 69

Conread position: 15-379
Cow position:
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-393
Cow position:
Alignm length: 381
Alignm identity: 260
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 65, 52

Conread position: 15-395
Cow position:
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 238

Conread position: 15-429
Cow position:
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-432
Cow position:
Alignm length: 438
Alignm identity: 302
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 232, 28

Conread position: 15-432
Cow position:
Alignm length: 425
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 59

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 15-441
Cow position:
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 80

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 69

Conread position: 15-441
Cow position:
Alignm length: 439
Alignm identity: 292
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 118, 66

Conread position: 15-441
Cow position:
Alignm length: 441
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 56

Conread position: 15-441
Cow position:
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 69

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 90

Conread position: 16-378
Cow position:
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 17-391
Cow position:
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 78

Conread position: 18-393
Cow position:
Alignm length: 376
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 18-429
Cow position:
Alignm length: 413
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 63

Conread position: 18-440
Cow position:
Alignm length: 443
Alignm identity: 295
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 8, 296

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 289

Conread position: 18-441
Cow position:
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 18-441
Cow position:
Alignm length: 425
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 66

Conread position: 18-441
Cow position:
Alignm length: 447
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 35

Conread position: 18-441
Cow position:
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 18-441
Cow position:
Alignm length: 424
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 18-441
Cow position:
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 18-441
Cow position:
Alignm length: 444
Alignm identity: 296
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 70, 156

Conread position: 18-441
Cow position:
Alignm length: 437
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 288

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 154

Conread position: 19-330
Cow position:
Alignm length: 329
Alignm identity: 220
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 19-346
Cow position:
Alignm length: 338
Alignm identity: 216
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 164

Conread position: 19-389
Cow position:
Alignm length: 387
Alignm identity: 263
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 75, 293

Conread position: 19-394
Cow position:
Alignm length: 381
Alignm identity: 234
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 174

Conread position: 19-400
Cow position:
Alignm length: 384
Alignm identity: 253
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 164, 55

Conread position: 19-441
Cow position:
Alignm length: 440
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 19-441
Cow position:
Alignm length: 440
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 282

Conread position: 19-441
Cow position:
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 19-441
Cow position:
Alignm length: 440
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 299

Conread position: 19-441
Cow position:
Alignm length: 435
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 157

Conread position: 20-302
Cow position:
Alignm length: 300
Alignm identity: 202
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 20-441
Cow position:
Alignm length: 438
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 197

Conread position: 20-441
Cow position:
Alignm length: 446
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 281

Conread position: 22-441
Cow position:
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 62

Conread position: 28-327
Cow position:
Alignm length: 317
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 154

Conread position: 38-402
Cow position:
Alignm length: 365
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 89-426
Cow position:
Alignm length: 339
Alignm identity: 233
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 151, 86

Conread position: 89-441
Cow position:
Alignm length: 364
Alignm identity: 234
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 203

Conread position: 94-421
Cow position:
Alignm length: 329
Alignm identity: 217
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 64, 15

Conread position: 98-441
Cow position:
Alignm length: 348
Alignm identity: 235
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 96, 202

Conread position: 100-420
Cow position:
Alignm length: 324
Alignm identity: 220
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 11, 164

Conread position: 103-347
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 107, 172

Conread position: 104-441
Cow position:
Alignm length: 338
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 105-327
Cow position:
Alignm length: 223
Alignm identity: 150
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 106-317
Cow position:
Alignm length: 212
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 107-441
Cow position:
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 292

Conread position: 107-442
Cow position:
Alignm length: 343
Alignm identity: 222
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 51

Conread position: 114-441
Cow position:
Alignm length: 328
Alignm identity: 231
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 118-441
Cow position:
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 283

Conread position: 122-441
Cow position:
Alignm length: 323
Alignm identity: 217
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 93

Conread position: 125-451
Cow position:
Alignm length: 333
Alignm identity: 211
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 30

Conread position: 128-441
Cow position:
Alignm length: 322
Alignm identity: 218
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 37

Conread position: 134-398
Cow position:
Alignm length: 265
Alignm identity: 179
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 135-400
Cow position:
Alignm length: 267
Alignm identity: 195
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 29, 106

Conread position: 142-436
Cow position:
Alignm length: 297
Alignm identity: 189
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 17

Conread position: 142-441
Cow position:
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 255

Conread position: 142-441
Cow position:
Alignm length: 302
Alignm identity: 198
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 159, 0

Conread position: 144-441
Cow position:
Alignm length: 310
Alignm identity: 207
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 18

Conread position: 151-441
Cow position:
Alignm length: 291
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 151-441
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 81

Conread position: 162-435
Cow position:
Alignm length: 274
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 145, 0

Conread position: 166-427
Cow position:
Alignm length: 262
Alignm identity: 187
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 6, 0

Conread position: 168-441
Cow position:
Alignm length: 279
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 215

Conread position: 170-441
Cow position:
Alignm length: 272
Alignm identity: 196
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 218, 0

Conread position: 171-435
Cow position:
Alignm length: 268
Alignm identity: 175
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 72, 117

Conread position: 176-441
Cow position:
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 180-441
Cow position:
Alignm length: 263
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 117

Conread position: 181-441
Cow position:
Alignm length: 261
Alignm identity: 176
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 188-431
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 125, 0

Conread position: 188-441
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 118, 0

Conread position: 191-441
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 112, 0

Conread position: 194-429
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 194-441
Cow position:
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 203-441
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 127, 82

Conread position: 223-441
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 85

Conread position: 250-441
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 173, 0

Show alignments to all cow chromosomes.