Cow genome map

Conread name: Ss1.1-Pig1-122O09.5

Conread position: 1-441
Cow position: chr12:2281947-2282381 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 82

Conread position: 2-226
Cow position: chr12:22121135-22121346 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 15-204
Cow position: chr12:21058556-21058370 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 149, 67

Conread position: 15-426
Cow position: chr12:252632-252236 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 69

Conread position: 15-435
Cow position: chr12:22332052-22332450 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 289
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 29, 81

Conread position: 15-436
Cow position: chr12:20998703-20998290 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 92

Conread position: 15-441
Cow position: chr12:6407217-6406811 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 69

Conread position: 15-441
Cow position: chr12:11097666-11098076 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position: chr12:21197251-21197661 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 15-441
Cow position: chr12:22206315-22205912 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position: chr12:27933517-27933111 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 18-441
Cow position: chr12:42860387-42859980 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 18-441
Cow position: chr12:43031976-43031548 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 295
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 75, 48

Conread position: 19-359
Cow position: chr12:21883420-21883779 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 68, 163

Conread position: 19-441
Cow position: chr12:8678689-8678287 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 19-441
Cow position: chr12:21207096-21207529 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 384

Conread position: 88-441
Cow position: chr12:15951763-15951425 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 88-441
Cow position: chr12:32653029-32653379 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 0

Conread position: 88-441
Cow position: chr12:37558041-37558389 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 98-432
Cow position: chr12:3360405-3360744 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 270, 310

Conread position: 98-441
Cow position: chr12:21255157-21254821 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 98-441
Cow position: chr12:21426197-21426528 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 98-441
Cow position: chr12:26141305-26141648 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 102-441
Cow position: chr12:1401989-1402325 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 0

Conread position: 104-441
Cow position: chr12:25101566-25101227 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 168

Conread position: 121-436
Cow position: chr12:21499636-21499946 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 208
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 122

Conread position: 131-441
Cow position: chr12:21901477-21901781 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 201

Conread position: 151-400
Cow position: chr12:26947718-26947460 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 159, 9

Conread position: 168-441
Cow position: chr12:8310745-8311020 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 169-429
Cow position: chr12:21941342-21941598 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 176-435
Cow position: chr12:16293496-16293752 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 5

Conread position: 176-441
Cow position: chr12:2368-2633 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 194-400
Cow position: chr12:48404638-48404843 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 102, 0

Conread position: 194-441
Cow position: chr12:14663022-14662777 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 112, 0

Conread position: 212-441
Cow position: chr12:28766410-28766182 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 98, 118

Conread position: 232-400
Cow position: chr12:42420784-42420616 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.