Cow genome map
Conread name: | Ss1.1-Pig1-122O09.5 |
Conread position: | 2-428 |
Cow position: | chr13:62328379-62327981 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 2-441 |
Cow position: | chr13:3276357-3276771 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 95 |
Conread position: | 2-441 |
Cow position: | chr13:31831811-31832215 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 2-441 |
Cow position: | chr13:33825537-33825118 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 235, 93 |
Conread position: | 2-441 |
Cow position: | chr13:34187496-34187074 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 15-356 |
Cow position: | chr13:61951392-61951720 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 231 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 107, 54 |
Conread position: | 15-429 |
Cow position: | chr13:32738603-32738219 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 283 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 15-433 |
Cow position: | chr13:15542670-15543072 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 321, 69 |
Conread position: | 15-439 |
Cow position: | chr13:2297620-2297187 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 191 |
Conread position: | 15-439 |
Cow position: | chr13:32544158-32544559 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr13:4940289-4940700 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr13:6668938-6668510 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 92 |
Conread position: | 15-441 |
Cow position: | chr13:30302276-30302680 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 15-441 |
Cow position: | chr13:31613131-31612722 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr13:31734901-31734467 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 292 |
Conread position: | 15-441 |
Cow position: | chr13:34867942-34868382 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 308 |
Conread position: | 15-441 |
Cow position: | chr13:35756439-35756854 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 310, 69 |
Conread position: | 15-441 |
Cow position: | chr13:54283795-54284196 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 80 |
Conread position: | 15-446 |
Cow position: | chr13:9043736-9044129 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-448 |
Cow position: | chr13:1593951-1593533 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 69 |
Conread position: | 16-402 |
Cow position: | chr13:48356529-48356901 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 260 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 135, 83 |
Conread position: | 17-447 |
Cow position: | chr13:34043156-34042745 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 18-276 |
Cow position: | chr13:13323984-13324252 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 177 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 18-326 |
Cow position: | chr13:49972889-49973216 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 227 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 18-339 |
Cow position: | chr13:676141-676477 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 232 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 69, 154 |
Conread position: | 18-432 |
Cow position: | chr13:2389622-2389185 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 18-441 |
Cow position: | chr13:3655100-3654697 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 18-441 |
Cow position: | chr13:15925176-15924769 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 18-441 |
Cow position: | chr13:21841022-21840581 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 18-441 |
Cow position: | chr13:30245552-30245120 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 18-441 |
Cow position: | chr13:32986868-32986436 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 225 |
Conread position: | 18-441 |
Cow position: | chr13:34326485-34326064 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 217 |
Conread position: | 18-441 |
Cow position: | chr13:50108641-50109077 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 205 |
Conread position: | 19-389 |
Cow position: | chr13:53833947-53834334 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 262 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 22-440 |
Cow position: | chr13:15521312-15520901 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 35-441 |
Cow position: | chr13:35029720-35030125 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 279 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 63, 261 |
Conread position: | 37-402 |
Cow position: | chr13:30140212-30140568 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 240 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 247, 61 |
Conread position: | 37-438 |
Cow position: | chr13:20543140-20542753 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 321, 12 |
Conread position: | 98-433 |
Cow position: | chr13:60704243-60703911 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 215 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 32, 42 |
Conread position: | 98-441 |
Cow position: | chr13:4872349-4872690 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 297 |
Conread position: | 98-441 |
Cow position: | chr13:17307756-17308088 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 234 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 69, 74 |
Conread position: | 99-432 |
Cow position: | chr13:15080898-15080579 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 215 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 33, 166 |
Conread position: | 104-441 |
Cow position: | chr13:4481760-4482090 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 104-441 |
Cow position: | chr13:33337045-33336709 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 61 |
Conread position: | 118-441 |
Cow position: | chr13:34692456-34692776 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 231 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 36, 92 |
Conread position: | 131-436 |
Cow position: | chr13:34143358-34143050 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 278 |
Conread position: | 131-441 |
Cow position: | chr13:33928245-33927949 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 216 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 24, 86 |
Conread position: | 139-380 |
Cow position: | chr13:30237490-30237723 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 171 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 114, 147 |
Conread position: | 141-396 |
Cow position: | chr13:46733030-46732782 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 173 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 198, 160 |
Conread position: | 166-402 |
Cow position: | chr13:34936478-34936713 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 183 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 28, 132 |
Conread position: | 168-429 |
Cow position: | chr13:2909104-2908846 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 233 |
Conread position: | 171-429 |
Cow position: | chr13:34912020-34911766 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 189 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 147, 0 |
Conread position: | 176-441 |
Cow position: | chr13:30657612-30657351 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 226, 0 |
Conread position: | 201-441 |
Cow position: | chr13:13046446-13046209 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 182 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 177, 202 |
Conread position: | 203-441 |
Cow position: | chr13:3058617-3058379 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 173 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.