Cow genome map

Conread name: Ss1.1-Pig1-122O09.5

Conread position: 2-428
Cow position: chr13:62328379-62327981 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 2-441
Cow position: chr13:3276357-3276771 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 95

Conread position: 2-441
Cow position: chr13:31831811-31832215 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 2-441
Cow position: chr13:33825537-33825118 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 93

Conread position: 2-441
Cow position: chr13:34187496-34187074 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 15-356
Cow position: chr13:61951392-61951720 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 107, 54

Conread position: 15-429
Cow position: chr13:32738603-32738219 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 283
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 52, 0

Conread position: 15-433
Cow position: chr13:15542670-15543072 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 69

Conread position: 15-439
Cow position: chr13:2297620-2297187 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 191

Conread position: 15-439
Cow position: chr13:32544158-32544559 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position: chr13:4940289-4940700 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position: chr13:6668938-6668510 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 92

Conread position: 15-441
Cow position: chr13:30302276-30302680 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 15-441
Cow position: chr13:31613131-31612722 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position: chr13:31734901-31734467 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 292

Conread position: 15-441
Cow position: chr13:34867942-34868382 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 308

Conread position: 15-441
Cow position: chr13:35756439-35756854 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 69

Conread position: 15-441
Cow position: chr13:54283795-54284196 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 80

Conread position: 15-446
Cow position: chr13:9043736-9044129 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-448
Cow position: chr13:1593951-1593533 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 69

Conread position: 16-402
Cow position: chr13:48356529-48356901 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 260
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 135, 83

Conread position: 17-447
Cow position: chr13:34043156-34042745 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 18-276
Cow position: chr13:13323984-13324252 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 18-326
Cow position: chr13:49972889-49973216 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 75, 0

Conread position: 18-339
Cow position: chr13:676141-676477 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 69, 154

Conread position: 18-432
Cow position: chr13:2389622-2389185 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 18-441
Cow position: chr13:3655100-3654697 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 18-441
Cow position: chr13:15925176-15924769 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 18-441
Cow position: chr13:21841022-21840581 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 18-441
Cow position: chr13:30245552-30245120 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 18-441
Cow position: chr13:32986868-32986436 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 225

Conread position: 18-441
Cow position: chr13:34326485-34326064 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 217

Conread position: 18-441
Cow position: chr13:50108641-50109077 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 205

Conread position: 19-389
Cow position: chr13:53833947-53834334 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 262
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 22-440
Cow position: chr13:15521312-15520901 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 35-441
Cow position: chr13:35029720-35030125 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 279
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 261

Conread position: 37-402
Cow position: chr13:30140212-30140568 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 247, 61

Conread position: 37-438
Cow position: chr13:20543140-20542753 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 12

Conread position: 98-433
Cow position: chr13:60704243-60703911 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 215
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 42

Conread position: 98-441
Cow position: chr13:4872349-4872690 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 297

Conread position: 98-441
Cow position: chr13:17307756-17308088 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 69, 74

Conread position: 99-432
Cow position: chr13:15080898-15080579 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 215
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 166

Conread position: 104-441
Cow position: chr13:4481760-4482090 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 104-441
Cow position: chr13:33337045-33336709 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 61

Conread position: 118-441
Cow position: chr13:34692456-34692776 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 36, 92

Conread position: 131-436
Cow position: chr13:34143358-34143050 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 278

Conread position: 131-441
Cow position: chr13:33928245-33927949 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 86

Conread position: 139-380
Cow position: chr13:30237490-30237723 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 114, 147

Conread position: 141-396
Cow position: chr13:46733030-46732782 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 198, 160

Conread position: 166-402
Cow position: chr13:34936478-34936713 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 132

Conread position: 168-429
Cow position: chr13:2909104-2908846 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 233

Conread position: 171-429
Cow position: chr13:34912020-34911766 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 147, 0

Conread position: 176-441
Cow position: chr13:30657612-30657351 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 0

Conread position: 201-441
Cow position: chr13:13046446-13046209 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 177, 202

Conread position: 203-441
Cow position: chr13:3058617-3058379 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.