Cow genome map
Conread name: | Ss1.1-Pig1-122O09.5 |
Conread position: | 1-396 |
Cow position: | chr14:46463862-46464236 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 266 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 113, 94 |
Conread position: | 1-441 |
Cow position: | chr14:35388071-35387640 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 20 |
Conread position: | 2-431 |
Cow position: | chr14:44551114-44551535 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 2-441 |
Cow position: | chr14:40338762-40339197 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 41 |
Conread position: | 9-433 |
Cow position: | chr14:38533231-38532812 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 298, 8 |
Conread position: | 10-433 |
Cow position: | chr14:45833239-45833644 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 56 |
Conread position: | 11-434 |
Cow position: | chr14:44376501-44376920 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 86 |
Conread position: | 15-390 |
Cow position: | chr14:50133984-50134349 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 83 |
Conread position: | 15-432 |
Cow position: | chr14:41754953-41755358 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 32 |
Conread position: | 15-435 |
Cow position: | chr14:46083708-46084109 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 15-441 |
Cow position: | chr14:11155073-11154663 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr14:13272334-13272748 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 32 |
Conread position: | 15-441 |
Cow position: | chr14:13302108-13302520 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 90 |
Conread position: | 15-441 |
Cow position: | chr14:17684483-17684885 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr14:20781539-20781946 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr14:22032598-22032192 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr14:44685109-44685538 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 92 |
Conread position: | 17-441 |
Cow position: | chr14:16274215-16273806 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 67 |
Conread position: | 18-387 |
Cow position: | chr14:2283043-2283424 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 154 |
Conread position: | 18-394 |
Cow position: | chr14:30597323-30596926 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 279 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 80, 168 |
Conread position: | 18-426 |
Cow position: | chr14:30585886-30585461 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 18-426 |
Cow position: | chr14:45916465-45916876 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 79 |
Conread position: | 18-441 |
Cow position: | chr14:5528150-5528551 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 18-441 |
Cow position: | chr14:17001965-17001565 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 57 |
Conread position: | 18-441 |
Cow position: | chr14:19329183-19328779 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 19-204 |
Cow position: | chr14:45304550-45304374 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 133 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 19-325 |
Cow position: | chr14:10561683-10562006 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 214 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 19-326 |
Cow position: | chr14:33394752-33394428 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 219 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 19-441 |
Cow position: | chr14:749628-750059 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 289 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 69, 156 |
Conread position: | 19-441 |
Cow position: | chr14:17492400-17491967 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 170 |
Conread position: | 19-441 |
Cow position: | chr14:45672992-45672555 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 288 |
Conread position: | 19-441 |
Cow position: | chr14:48255228-48254821 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 65 |
Conread position: | 22-441 |
Cow position: | chr14:7471463-7471866 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 22-441 |
Cow position: | chr14:28994771-28994365 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 51 |
Conread position: | 36-441 |
Cow position: | chr14:45205134-45205560 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 294 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 60, 10 |
Conread position: | 38-402 |
Cow position: | chr14:22018488-22018857 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 252 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 94, 45 |
Conread position: | 38-433 |
Cow position: | chr14:45159955-45160347 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 59 |
Conread position: | 38-441 |
Cow position: | chr14:44225514-44225899 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 40-427 |
Cow position: | chr14:44780809-44780441 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 252 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 40-427 |
Cow position: | chr14:44783149-44782781 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 252 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 91-436 |
Cow position: | chr14:44130056-44130405 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 246 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 34, 177 |
Conread position: | 96-446 |
Cow position: | chr14:35928326-35928673 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 239 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 125, 7 |
Conread position: | 98-369 |
Cow position: | chr14:17241388-17241653 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 180 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 197, 0 |
Conread position: | 104-447 |
Cow position: | chr14:50109733-50110077 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 129 |
Conread position: | 107-441 |
Cow position: | chr14:37223058-37223392 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 305, 293 |
Conread position: | 126-389 |
Cow position: | chr14:44580122-44580380 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 185 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 6, 51 |
Conread position: | 128-402 |
Cow position: | chr14:14309880-14309613 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 191 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 77, 23 |
Conread position: | 128-441 |
Cow position: | chr14:31607742-31607430 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 206 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 185, 59 |
Conread position: | 131-441 |
Cow position: | chr14:7831359-7831048 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 217 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 22, 125 |
Conread position: | 135-396 |
Cow position: | chr14:16920502-16920237 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 185 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 135-441 |
Cow position: | chr14:47623756-47624059 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 37 |
Conread position: | 139-432 |
Cow position: | chr14:40170491-40170186 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 208 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 182, 203 |
Conread position: | 142-441 |
Cow position: | chr14:45079732-45080024 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 209 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 201, 22 |
Conread position: | 144-441 |
Cow position: | chr14:11467792-11468089 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 204 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 19, 80 |
Conread position: | 148-419 |
Cow position: | chr14:14422807-14422543 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 186 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 150-441 |
Cow position: | chr14:23256556-23256849 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 202 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 140, 258 |
Conread position: | 151-400 |
Cow position: | chr14:44261890-44261639 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 173 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 112, 100 |
Conread position: | 170-440 |
Cow position: | chr14:9044784-9045054 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 191 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 46, 36 |
Conread position: | 175-441 |
Cow position: | chr14:29048670-29048411 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 190 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 135, 88 |
Conread position: | 176-435 |
Cow position: | chr14:34774827-34775078 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 171 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 176-435 |
Cow position: | chr14:41085582-41085328 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 0 |
Conread position: | 176-441 |
Cow position: | chr14:45712752-45712485 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 5 |
Conread position: | 176-441 |
Cow position: | chr14:45850453-45850715 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 5 |
Conread position: | 181-390 |
Cow position: | chr14:1499983-1500193 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 157 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 186, 0 |
Conread position: | 181-435 |
Cow position: | chr14:23529762-23529526 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 174 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 188-441 |
Cow position: | chr14:23690989-23690734 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 0 |
Conread position: | 189-441 |
Cow position: | chr14:45767247-45767496 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 180 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 131, 22 |
Conread position: | 191-433 |
Cow position: | chr14:36967498-36967741 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 176 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 191-441 |
Cow position: | chr14:13660752-13660497 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 178 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 191-441 |
Cow position: | chr14:44856185-44855935 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 202-432 |
Cow position: | chr14:13326858-13326630 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 156 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 186, 0 |
Conread position: | 206-441 |
Cow position: | chr14:13778119-13778354 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 169 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 207-395 |
Cow position: | chr14:15277602-15277407 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 148 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 255-441 |
Cow position: | chr14:44421862-44422047 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 138 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 123, 0 |
Show alignments to all cow chromosomes.