Cow genome map

Conread name: Ss1.1-Pig1-122O09.5

Conread position: 1-402
Cow position:
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 83

Conread position: 1-429
Cow position:
Alignm length: 441
Alignm identity: 279
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 48

Conread position: 1-429
Cow position:
Alignm length: 429
Alignm identity: 281
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 1-434
Cow position:
Alignm length: 434
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 1-436
Cow position:
Alignm length: 446
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 55

Conread position: 1-441
Cow position:
Alignm length: 448
Alignm identity: 283
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 110

Conread position: 2-429
Cow position:
Alignm length: 436
Alignm identity: 290
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 193, 33

Conread position: 2-433
Cow position:
Alignm length: 433
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 429, 93

Conread position: 2-441
Cow position:
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 11-441
Cow position:
Alignm length: 433
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 74

Conread position: 11-441
Cow position:
Alignm length: 431
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 12-401
Cow position:
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 15-271
Cow position:
Alignm length: 257
Alignm identity: 174
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 68, 0

Conread position: 15-330
Cow position:
Alignm length: 333
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 70, 303

Conread position: 15-347
Cow position:
Alignm length: 335
Alignm identity: 217
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 269, 22

Conread position: 15-381
Cow position:
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 273

Conread position: 15-401
Cow position:
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 68

Conread position: 15-402
Cow position:
Alignm length: 391
Alignm identity: 270
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 142, 87

Conread position: 15-429
Cow position:
Alignm length: 448
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 17

Conread position: 15-433
Cow position:
Alignm length: 421
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 69

Conread position: 15-433
Cow position:
Alignm length: 442
Alignm identity: 297
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 73, 226

Conread position: 15-436
Cow position:
Alignm length: 439
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 50

Conread position: 15-441
Cow position:
Alignm length: 444
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 230

Conread position: 15-441
Cow position:
Alignm length: 435
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 70

Conread position: 15-441
Cow position:
Alignm length: 431
Alignm identity: 292
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 179, 68

Conread position: 15-441
Cow position:
Alignm length: 431
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 92

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 434
Alignm identity: 275
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 227, 7

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 444
Alignm identity: 297
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 73, 242

Conread position: 15-441
Cow position:
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 76

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 15-441
Cow position:
Alignm length: 429
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 69

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 446
Alignm identity: 292
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 73, 299

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 15-441
Cow position:
Alignm length: 431
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 68

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 16-300
Cow position:
Alignm length: 285
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 16-402
Cow position:
Alignm length: 393
Alignm identity: 257
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 282, 56

Conread position: 16-441
Cow position:
Alignm length: 443
Alignm identity: 293
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 77, 311

Conread position: 17-388
Cow position:
Alignm length: 374
Alignm identity: 234
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 34

Conread position: 17-435
Cow position:
Alignm length: 426
Alignm identity: 284
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 247, 84

Conread position: 17-441
Cow position:
Alignm length: 440
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 21

Conread position: 17-441
Cow position:
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 66

Conread position: 18-342
Cow position:
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 18-393
Cow position:
Alignm length: 393
Alignm identity: 264
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 70, 277

Conread position: 18-429
Cow position:
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 77

Conread position: 18-433
Cow position:
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 77

Conread position: 18-433
Cow position:
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 69

Conread position: 18-436
Cow position:
Alignm length: 420
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 56

Conread position: 18-441
Cow position:
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 295
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 70, 294

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 19

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 199

Conread position: 18-441
Cow position:
Alignm length: 448
Alignm identity: 295
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 75, 433

Conread position: 18-441
Cow position:
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 66

Conread position: 18-447
Cow position:
Alignm length: 448
Alignm identity: 299
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 25, 248

Conread position: 19-307
Cow position:
Alignm length: 306
Alignm identity: 200
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 19-358
Cow position:
Alignm length: 359
Alignm identity: 238
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 153

Conread position: 19-393
Cow position:
Alignm length: 395
Alignm identity: 266
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 69, 0

Conread position: 19-433
Cow position:
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 56

Conread position: 19-441
Cow position:
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 19-441
Cow position:
Alignm length: 441
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 326

Conread position: 19-441
Cow position:
Alignm length: 440
Alignm identity: 291
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 68, 299

Conread position: 19-441
Cow position:
Alignm length: 440
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 23-441
Cow position:
Alignm length: 420
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 61

Conread position: 40-436
Cow position:
Alignm length: 397
Alignm identity: 265
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 48-400
Cow position:
Alignm length: 355
Alignm identity: 239
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 14, 6

Conread position: 48-441
Cow position:
Alignm length: 395
Alignm identity: 266
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 86, 47

Conread position: 49-379
Cow position:
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 48

Conread position: 51-441
Cow position:
Alignm length: 393
Alignm identity: 263
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 47

Conread position: 60-441
Cow position:
Alignm length: 384
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 85-433
Cow position:
Alignm length: 350
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 118

Conread position: 87-447
Cow position:
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 24

Conread position: 88-393
Cow position:
Alignm length: 310
Alignm identity: 214
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 48, 158

Conread position: 88-441
Cow position:
Alignm length: 355
Alignm identity: 240
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 154, 176

Conread position: 92-309
Cow position:
Alignm length: 218
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 98-402
Cow position:
Alignm length: 307
Alignm identity: 204
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 26

Conread position: 98-433
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 98-441
Cow position:
Alignm length: 345
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 108

Conread position: 98-441
Cow position:
Alignm length: 344
Alignm identity: 229
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 259, 0

Conread position: 98-441
Cow position:
Alignm length: 344
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 206, 0

Conread position: 98-441
Cow position:
Alignm length: 347
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 102-441
Cow position:
Alignm length: 340
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 104-441
Cow position:
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 18

Conread position: 104-441
Cow position:
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 107-441
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 21

Conread position: 107-441
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 113-441
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 14, 211

Conread position: 114-441
Cow position:
Alignm length: 335
Alignm identity: 231
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 198, 28

Conread position: 116-402
Cow position:
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 121-429
Cow position:
Alignm length: 319
Alignm identity: 212
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 227, 34

Conread position: 121-441
Cow position:
Alignm length: 322
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 216

Conread position: 122-398
Cow position:
Alignm length: 282
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 49

Conread position: 122-441
Cow position:
Alignm length: 325
Alignm identity: 211
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 19, 74

Conread position: 123-441
Cow position:
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 192

Conread position: 125-435
Cow position:
Alignm length: 311
Alignm identity: 203
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 128-400
Cow position:
Alignm length: 274
Alignm identity: 188
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 33

Conread position: 129-441
Cow position:
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 36

Conread position: 131-441
Cow position:
Alignm length: 312
Alignm identity: 211
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 133, 28

Conread position: 133-431
Cow position:
Alignm length: 308
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 187

Conread position: 142-436
Cow position:
Alignm length: 296
Alignm identity: 201
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 256, 276

Conread position: 145-441
Cow position:
Alignm length: 297
Alignm identity: 195
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 150, 0

Conread position: 151-441
Cow position:
Alignm length: 292
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 122

Conread position: 162-441
Cow position:
Alignm length: 285
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 17

Conread position: 169-433
Cow position:
Alignm length: 266
Alignm identity: 188
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 35, 115

Conread position: 176-402
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 34, 0

Conread position: 176-429
Cow position:
Alignm length: 254
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 177-441
Cow position:
Alignm length: 265
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 178-441
Cow position:
Alignm length: 264
Alignm identity: 184
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 179-399
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 179-441
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 181-394
Cow position:
Alignm length: 219
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 188-441
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 215, 122

Conread position: 192-441
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 212, 0

Conread position: 194-389
Cow position:
Alignm length: 197
Alignm identity: 154
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 146, 135

Conread position: 194-441
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 107, 42

Conread position: 201-441
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 99, 0

Conread position: 205-441
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 101, 0

Conread position: 209-441
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 11

Conread position: 210-441
Cow position:
Alignm length: 235
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 148

Conread position: 230-435
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 255-441
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 52, 95

Conread position: 297-441
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 116

Show alignments to all cow chromosomes.