Cow genome map

Conread name: Ss1.1-Pig1-122O09.5

Conread position: 1-402
Cow position:
Alignm length: 405
Alignm identity: 269
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 34

Conread position: 1-441
Cow position:
Alignm length: 442
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 17

Conread position: 1-441
Cow position:
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 17

Conread position: 2-436
Cow position:
Alignm length: 435
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 2-441
Cow position:
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 4-441
Cow position:
Alignm length: 439
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 80

Conread position: 4-441
Cow position:
Alignm length: 438
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 13-436
Cow position:
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 82

Conread position: 15-265
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 15-276
Cow position:
Alignm length: 262
Alignm identity: 183
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 15-305
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 178, 74

Conread position: 15-429
Cow position:
Alignm length: 416
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 92

Conread position: 15-433
Cow position:
Alignm length: 439
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 37

Conread position: 15-439
Cow position:
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 68

Conread position: 15-440
Cow position:
Alignm length: 426
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 15-441
Cow position:
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 69

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 432
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 69

Conread position: 15-441
Cow position:
Alignm length: 432
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 69

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-447
Cow position:
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 16-441
Cow position:
Alignm length: 430
Alignm identity: 285
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 61, 122

Conread position: 17-402
Cow position:
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 67

Conread position: 17-432
Cow position:
Alignm length: 417
Alignm identity: 281
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 15, 79

Conread position: 17-439
Cow position:
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 17

Conread position: 18-432
Cow position:
Alignm length: 416
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 14

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 300
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 80, 183

Conread position: 18-441
Cow position:
Alignm length: 443
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 214

Conread position: 18-442
Cow position:
Alignm length: 442
Alignm identity: 298
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 80, 230

Conread position: 19-439
Cow position:
Alignm length: 441
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 135

Conread position: 19-440
Cow position:
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 65

Conread position: 19-441
Cow position:
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 19-441
Cow position:
Alignm length: 433
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 275

Conread position: 35-441
Cow position:
Alignm length: 418
Alignm identity: 273
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 63, 141

Conread position: 35-441
Cow position:
Alignm length: 407
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 53-428
Cow position:
Alignm length: 376
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 82-441
Cow position:
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 298

Conread position: 85-441
Cow position:
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 86-441
Cow position:
Alignm length: 357
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 80

Conread position: 89-427
Cow position:
Alignm length: 344
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 20

Conread position: 97-435
Cow position:
Alignm length: 346
Alignm identity: 227
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 21

Conread position: 98-396
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 98-441
Cow position:
Alignm length: 344
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 99-434
Cow position:
Alignm length: 344
Alignm identity: 227
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 14, 82

Conread position: 99-441
Cow position:
Alignm length: 355
Alignm identity: 234
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 23, 219

Conread position: 104-365
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 104-441
Cow position:
Alignm length: 338
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 107-349
Cow position:
Alignm length: 243
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 209, 0

Conread position: 107-433
Cow position:
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 53

Conread position: 107-441
Cow position:
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 72

Conread position: 107-441
Cow position:
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 116-441
Cow position:
Alignm length: 326
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 118-448
Cow position:
Alignm length: 338
Alignm identity: 232
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 137

Conread position: 120-441
Cow position:
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-432
Cow position:
Alignm length: 315
Alignm identity: 209
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 278, 20

Conread position: 122-348
Cow position:
Alignm length: 228
Alignm identity: 153
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 188, 101

Conread position: 127-393
Cow position:
Alignm length: 267
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 0

Conread position: 128-441
Cow position:
Alignm length: 319
Alignm identity: 222
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 73, 158

Conread position: 131-436
Cow position:
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 142-402
Cow position:
Alignm length: 262
Alignm identity: 194
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 54, 126

Conread position: 145-435
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 256, 17

Conread position: 160-446
Cow position:
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 19

Conread position: 172-441
Cow position:
Alignm length: 271
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 161

Conread position: 175-441
Cow position:
Alignm length: 267
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 191-441
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 102, 0

Conread position: 193-441
Cow position:
Alignm length: 250
Alignm identity: 186
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 202, 89

Conread position: 198-362
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 97, 0

Conread position: 198-441
Cow position:
Alignm length: 244
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 199-356
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 83

Conread position: 199-441
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 283-441
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.