Cow genome map

Conread name: Ss1.1-Pig1-122O09.5

Conread position: 1-433
Cow position:
Alignm length: 436
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 82

Conread position: 1-441
Cow position:
Alignm length: 442
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 34

Conread position: 2-441
Cow position:
Alignm length: 441
Alignm identity: 288
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 231, 82

Conread position: 8-441
Cow position:
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 15-346
Cow position:
Alignm length: 332
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 15-402
Cow position:
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-429
Cow position:
Alignm length: 416
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 69

Conread position: 15-433
Cow position:
Alignm length: 427
Alignm identity: 267
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 106

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 52

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 55

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 16-441
Cow position:
Alignm length: 436
Alignm identity: 288
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 148, 83

Conread position: 18-330
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 66, 0

Conread position: 18-396
Cow position:
Alignm length: 398
Alignm identity: 272
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 69, 290

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 35

Conread position: 19-441
Cow position:
Alignm length: 425
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 47

Conread position: 19-441
Cow position:
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 28-441
Cow position:
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 76

Conread position: 38-441
Cow position:
Alignm length: 406
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 80

Conread position: 44-362
Cow position:
Alignm length: 321
Alignm identity: 223
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 17, 31

Conread position: 73-430
Cow position:
Alignm length: 361
Alignm identity: 228
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 26

Conread position: 85-420
Cow position:
Alignm length: 337
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 0

Conread position: 98-389
Cow position:
Alignm length: 292
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 99-435
Cow position:
Alignm length: 354
Alignm identity: 233
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 68

Conread position: 103-441
Cow position:
Alignm length: 340
Alignm identity: 216
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 16, 21

Conread position: 104-441
Cow position:
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 110-435
Cow position:
Alignm length: 332
Alignm identity: 211
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 28

Conread position: 118-442
Cow position:
Alignm length: 328
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 42

Conread position: 141-441
Cow position:
Alignm length: 301
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 151-429
Cow position:
Alignm length: 280
Alignm identity: 201
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 15

Conread position: 172-452
Cow position:
Alignm length: 281
Alignm identity: 198
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 68, 0

Conread position: 175-396
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 122

Conread position: 176-441
Cow position:
Alignm length: 266
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 180-441
Cow position:
Alignm length: 262
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 188-321
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 188-441
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 190-429
Cow position:
Alignm length: 240
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 133, 0

Conread position: 194-441
Cow position:
Alignm length: 249
Alignm identity: 188
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 200, 33

Conread position: 194-441
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 205, 0

Conread position: 292-441
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.