Cow genome map
| Conread name: | Ss1.1-Pig1-122O09.5 |
| Conread position: | 1-433 |
| Cow position: | chr20:11276817-11276413 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 82 |
| Conread position: | 1-441 |
| Cow position: | chr20:18316120-18315694 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 34 |
| Conread position: | 2-441 |
| Cow position: | chr20:3252663-3252243 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 231, 82 |
| Conread position: | 8-441 |
| Cow position: | chr20:27868671-27869087 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 15-346 |
| Cow position: | chr20:15291529-15291843 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 15-402 |
| Cow position: | chr20:8005032-8004663 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 15-429 |
| Cow position: | chr20:7116990-7116591 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 389, 69 |
| Conread position: | 15-433 |
| Cow position: | chr20:2791883-2791464 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 68, 106 |
| Conread position: | 15-441 |
| Cow position: | chr20:5534428-5534829 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 15-441 |
| Cow position: | chr20:10103071-10102659 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 364, 52 |
| Conread position: | 15-441 |
| Cow position: | chr20:21913819-21914216 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 15-441 |
| Cow position: | chr20:23470180-23469769 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 55 |
| Conread position: | 15-441 |
| Cow position: | chr20:23798357-23798772 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 15-441 |
| Cow position: | chr20:30683819-30684229 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 16-441 |
| Cow position: | chr20:28593218-28593638 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 148, 83 |
| Conread position: | 18-330 |
| Cow position: | chr20:35118735-35119026 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 18-396 |
| Cow position: | chr20:822207-822596 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 69, 290 |
| Conread position: | 18-441 |
| Cow position: | chr20:19437418-19437848 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 19-441 |
| Cow position: | chr20:21393051-21393460 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 47 |
| Conread position: | 19-441 |
| Cow position: | chr20:25851501-25851100 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 28-441 |
| Cow position: | chr20:15064242-15064659 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 76 |
| Conread position: | 38-441 |
| Cow position: | chr20:28160270-28160672 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 80 |
| Conread position: | 44-362 |
| Cow position: | chr20:13681581-13681280 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 73-430 |
| Cow position: | chr20:2676647-2676996 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 99, 26 |
| Conread position: | 85-420 |
| Cow position: | chr20:29947720-29948056 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 0 |
| Conread position: | 98-389 |
| Cow position: | chr20:31123953-31124244 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 99-435 |
| Cow position: | chr20:22206083-22206433 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 68 |
| Conread position: | 103-441 |
| Cow position: | chr20:20905629-20905297 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 16, 21 |
| Conread position: | 104-441 |
| Cow position: | chr20:13762463-13762792 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 110-435 |
| Cow position: | chr20:29572626-29572303 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 28 |
| Conread position: | 118-442 |
| Cow position: | chr20:5483763-5484083 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 141-441 |
| Cow position: | chr20:12439169-12438871 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 151-429 |
| Cow position: | chr20:3032538-3032807 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 172-452 |
| Cow position: | chr20:10846454-10846177 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 175-396 |
| Cow position: | chr20:15098244-15098025 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 122 |
| Conread position: | 176-441 |
| Cow position: | chr20:4800019-4799761 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 180-441 |
| Cow position: | chr20:5561086-5560825 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-321 |
| Cow position: | chr20:19005989-19005859 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 188-441 |
| Cow position: | chr20:24614187-24614436 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 190-429 |
| Cow position: | chr20:3270362-3270589 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 194-441 |
| Cow position: | chr20:8313787-8313546 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 200, 33 |
| Conread position: | 194-441 |
| Cow position: | chr20:28565957-28565706 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 292-441 |
| Cow position: | chr20:35119066-35119215 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.