Cow genome map
Conread name: | Ss1.1-Pig1-122O09.5 |
Conread position: | 1-402 |
Cow position: | chr22:45880703-45880337 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 333, 14 |
Conread position: | 1-429 |
Cow position: | chr22:3307310-3306908 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 1-433 |
Cow position: | chr22:1321041-1321441 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 70 |
Conread position: | 2-432 |
Cow position: | chr22:36736194-36736605 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 393, 93 |
Conread position: | 2-444 |
Cow position: | chr22:36534542-36534124 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 32 |
Conread position: | 10-327 |
Cow position: | chr22:36180549-36180867 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 220 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 87, 270 |
Conread position: | 10-441 |
Cow position: | chr22:27310389-27309937 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 11-441 |
Cow position: | chr22:5307506-5307954 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 178 |
Conread position: | 12-441 |
Cow position: | chr22:1285516-1285095 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 37 |
Conread position: | 15-284 |
Cow position: | chr22:27386964-27386707 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 192 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 15-395 |
Cow position: | chr22:526483-526119 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 90 |
Conread position: | 15-398 |
Cow position: | chr22:44456739-44457107 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 20 |
Conread position: | 15-401 |
Cow position: | chr22:13772209-13772586 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 80 |
Conread position: | 15-429 |
Cow position: | chr22:15850759-15851159 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 81 |
Conread position: | 15-435 |
Cow position: | chr22:1294074-1293666 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 68 |
Conread position: | 15-439 |
Cow position: | chr22:19144271-19143865 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr22:561272-560863 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr22:17329310-17328903 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr22:21588765-21589169 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr22:31312771-31313177 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr22:34167747-34168168 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 15-441 |
Cow position: | chr22:37264847-37265290 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 160 |
Conread position: | 15-441 |
Cow position: | chr22:39470090-39469683 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 15-441 |
Cow position: | chr22:42990603-42991008 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 15-441 |
Cow position: | chr22:44933406-44933816 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr22:46585893-46585475 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 16-436 |
Cow position: | chr22:7276946-7277354 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 6 |
Conread position: | 17-442 |
Cow position: | chr22:39882735-39882339 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 18-395 |
Cow position: | chr22:16199893-16200283 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 252 |
Conread position: | 18-439 |
Cow position: | chr22:44489292-44489721 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 358 |
Conread position: | 18-440 |
Cow position: | chr22:44370217-44369785 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 293 |
Conread position: | 18-441 |
Cow position: | chr22:693039-693468 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 28 |
Conread position: | 18-441 |
Cow position: | chr22:1878234-1878628 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 279 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 123, 16 |
Conread position: | 18-441 |
Cow position: | chr22:10910458-10910021 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 363 |
Conread position: | 18-441 |
Cow position: | chr22:24949226-24949666 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 18-441 |
Cow position: | chr22:35672959-35672519 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 19-433 |
Cow position: | chr22:37131087-37131479 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 286 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 196, 77 |
Conread position: | 19-439 |
Cow position: | chr22:6984652-6985089 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 19-441 |
Cow position: | chr22:10546048-10546481 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 290 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 74, 402 |
Conread position: | 34-401 |
Cow position: | chr22:1271062-1270702 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 12 |
Conread position: | 35-432 |
Cow position: | chr22:37073712-37073335 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 280 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 19, 62 |
Conread position: | 38-304 |
Cow position: | chr22:48004107-48004367 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 179 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 176, 45 |
Conread position: | 39-436 |
Cow position: | chr22:6504209-6503839 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 273 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 40-368 |
Cow position: | chr22:12732616-12732308 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 235 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 17, 9 |
Conread position: | 73-441 |
Cow position: | chr22:37067452-37067078 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 262 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 44, 128 |
Conread position: | 83-396 |
Cow position: | chr22:327669-327356 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 290, 48 |
Conread position: | 84-441 |
Cow position: | chr22:5933488-5933148 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 247 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 223, 55 |
Conread position: | 88-441 |
Cow position: | chr22:18476277-18475929 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 0 |
Conread position: | 90-441 |
Cow position: | chr22:8136710-8136360 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 262 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 11, 29 |
Conread position: | 98-441 |
Cow position: | chr22:3278856-3278517 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 235 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 240, 182 |
Conread position: | 98-441 |
Cow position: | chr22:5233803-5233469 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 233 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 182, 0 |
Conread position: | 104-260 |
Cow position: | chr22:15314857-15314701 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 116 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 113-441 |
Cow position: | chr22:31335522-31335197 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 120-441 |
Cow position: | chr22:11030502-11030796 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 222 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 276, 37 |
Conread position: | 121-399 |
Cow position: | chr22:35943876-35943598 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 181 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 60, 49 |
Conread position: | 126-441 |
Cow position: | chr22:33350688-33351005 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 202 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 6, 78 |
Conread position: | 129-429 |
Cow position: | chr22:46636173-46635873 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 207 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 15, 8 |
Conread position: | 131-441 |
Cow position: | chr22:10077222-10076915 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 215 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 49, 28 |
Conread position: | 141-441 |
Cow position: | chr22:309261-309550 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 199 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 200, 17 |
Conread position: | 143-441 |
Cow position: | chr22:44395321-44395617 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 150-441 |
Cow position: | chr22:44353402-44353111 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 267, 252 |
Conread position: | 151-402 |
Cow position: | chr22:42771098-42771345 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 185 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 151-436 |
Cow position: | chr22:1318944-1319228 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 28 |
Conread position: | 160-442 |
Cow position: | chr22:41420129-41419851 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 227 |
Conread position: | 163-336 |
Cow position: | chr22:40380758-40380930 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 125 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 24, 16 |
Conread position: | 168-429 |
Cow position: | chr22:118253-117993 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 194 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 19, 246 |
Conread position: | 170-347 |
Cow position: | chr22:18930143-18930320 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 123 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 176-441 |
Cow position: | chr22:5672310-5672573 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 191 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 227, 237 |
Conread position: | 176-441 |
Cow position: | chr22:46852914-46853178 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 188 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 158, 205 |
Conread position: | 189-441 |
Cow position: | chr22:36861946-36861694 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 193-441 |
Cow position: | chr22:18816793-18816545 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 179 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 197, 150 |
Conread position: | 207-402 |
Cow position: | chr22:158312-158113 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 151 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 214-441 |
Cow position: | chr22:32485718-32485500 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 169 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 233-441 |
Cow position: | chr22:4065269-4065477 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 146 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.