Cow genome map

Conread name: Ss1.1-Pig1-122O09.5

Conread position: 1-441
Cow position:
Alignm length: 442
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 48

Conread position: 2-192
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 2-441
Cow position:
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 93

Conread position: 6-435
Cow position:
Alignm length: 435
Alignm identity: 268
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 307, 39

Conread position: 8-419
Cow position:
Alignm length: 415
Alignm identity: 287
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 291, 77

Conread position: 10-402
Cow position:
Alignm length: 399
Alignm identity: 256
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 185, 92

Conread position: 11-321
Cow position:
Alignm length: 311
Alignm identity: 217
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 73, 0

Conread position: 11-441
Cow position:
Alignm length: 432
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 96

Conread position: 15-204
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 15-395
Cow position:
Alignm length: 398
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 292

Conread position: 15-426
Cow position:
Alignm length: 416
Alignm identity: 273
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 26, 20

Conread position: 15-441
Cow position:
Alignm length: 438
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 69

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 15-441
Cow position:
Alignm length: 445
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 15-441
Cow position:
Alignm length: 431
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 100

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 69

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 69

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 69

Conread position: 19-441
Cow position:
Alignm length: 440
Alignm identity: 296
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 68, 48

Conread position: 19-441
Cow position:
Alignm length: 439
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 205

Conread position: 20-433
Cow position:
Alignm length: 416
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 63

Conread position: 22-441
Cow position:
Alignm length: 437
Alignm identity: 291
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 66, 201

Conread position: 24-330
Cow position:
Alignm length: 310
Alignm identity: 218
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 215, 77

Conread position: 88-452
Cow position:
Alignm length: 367
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 84

Conread position: 89-441
Cow position:
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 101-393
Cow position:
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 9

Conread position: 103-441
Cow position:
Alignm length: 342
Alignm identity: 213
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 16

Conread position: 104-441
Cow position:
Alignm length: 339
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 202

Conread position: 105-441
Cow position:
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 0

Conread position: 115-441
Cow position:
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 116-436
Cow position:
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 213

Conread position: 120-352
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 220, 14

Conread position: 123-441
Cow position:
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 125-436
Cow position:
Alignm length: 315
Alignm identity: 202
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 199, 155

Conread position: 128-400
Cow position:
Alignm length: 275
Alignm identity: 199
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 66, 95

Conread position: 131-441
Cow position:
Alignm length: 314
Alignm identity: 216
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 196

Conread position: 150-441
Cow position:
Alignm length: 292
Alignm identity: 168
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 156-441
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 180

Conread position: 162-435
Cow position:
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 162-441
Cow position:
Alignm length: 281
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 168-441
Cow position:
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 106

Conread position: 171-435
Cow position:
Alignm length: 267
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 109, 116

Conread position: 178-441
Cow position:
Alignm length: 264
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 188-441
Cow position:
Alignm length: 255
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 194-433
Cow position:
Alignm length: 242
Alignm identity: 180
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 107, 118

Conread position: 194-441
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 200-441
Cow position:
Alignm length: 242
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 230-384
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 237-436
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 165, 0

Conread position: 272-441
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.