Cow genome map
| Conread name: | Ss1.1-Pig1-122O09.5 |
| Conread position: | 1-469 |
| Cow position: | chr26:9846665-9846207 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 95 |
| Conread position: | 4-441 |
| Cow position: | chr26:9563878-9563458 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 15-342 |
| Cow position: | chr26:30590750-30590439 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 15-441 |
| Cow position: | chr26:17397446-17397030 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 90 |
| Conread position: | 15-441 |
| Cow position: | chr26:19352023-19351613 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 16-441 |
| Cow position: | chr26:9851154-9850724 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 291 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 264, 65 |
| Conread position: | 16-441 |
| Cow position: | chr26:9854618-9854190 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 264, 65 |
| Conread position: | 18-441 |
| Cow position: | chr26:2352885-2352458 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 18-441 |
| Cow position: | chr26:12589100-12588665 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 160 |
| Conread position: | 18-441 |
| Cow position: | chr26:30782229-30782665 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 295 |
| Conread position: | 19-378 |
| Cow position: | chr26:8918448-8918817 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 69, 164 |
| Conread position: | 19-393 |
| Cow position: | chr26:24201083-24201474 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 19-396 |
| Cow position: | chr26:19997948-19998342 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 19-434 |
| Cow position: | chr26:3031347-3030917 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 347 |
| Conread position: | 19-441 |
| Cow position: | chr26:11254599-11254157 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 48 |
| Conread position: | 20-441 |
| Cow position: | chr26:2198108-2198527 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 277 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 126, 64 |
| Conread position: | 28-345 |
| Cow position: | chr26:34012518-34012824 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 280, 67 |
| Conread position: | 98-441 |
| Cow position: | chr26:8869436-8869777 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 98-441 |
| Cow position: | chr26:9112023-9112366 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 103-435 |
| Cow position: | chr26:3074096-3074421 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 116-333 |
| Cow position: | chr26:35150296-35150080 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 196, 76 |
| Conread position: | 118-393 |
| Cow position: | chr26:12655537-12655798 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 121-388 |
| Cow position: | chr26:20262449-20262694 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 134-438 |
| Cow position: | chr26:4605590-4605284 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 142-447 |
| Cow position: | chr26:5674771-5675075 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 79 |
| Conread position: | 166-436 |
| Cow position: | chr26:20254701-20254965 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 168-327 |
| Cow position: | chr26:19142351-19142507 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 168-400 |
| Cow position: | chr26:8283414-8283182 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 176-441 |
| Cow position: | chr26:12574761-12574497 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 229 |
| Conread position: | 176-441 |
| Cow position: | chr26:23605274-23604998 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 141, 82 |
| Conread position: | 179-441 |
| Cow position: | chr26:6850536-6850274 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-441 |
| Cow position: | chr26:18854734-18854988 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 62, 76 |
| Conread position: | 187-441 |
| Cow position: | chr26:15145111-15144860 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 240, 0 |
| Conread position: | 191-441 |
| Cow position: | chr26:3691451-3691706 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 114, 192 |
| Conread position: | 252-427 |
| Cow position: | chr26:11537121-11536946 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 106, 8 |
Show alignments to all cow chromosomes.