Cow genome map
| Conread name: | Ss1.1-Pig1-122O09.5 |
| Conread position: | 1-271 |
| Cow position: | chr27:5985688-5985427 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 2-446 |
| Cow position: | chr27:16438762-16439167 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 436, 13 |
| Conread position: | 15-310 |
| Cow position: | chr27:15639083-15638804 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 15-345 |
| Cow position: | chr27:11471965-11471652 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 82, 92 |
| Conread position: | 15-441 |
| Cow position: | chr27:892641-893046 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 15-441 |
| Cow position: | chr27:1208783-1209188 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 15-441 |
| Cow position: | chr27:5910296-5910703 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 15-441 |
| Cow position: | chr27:9993766-9993369 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 15-441 |
| Cow position: | chr27:14461029-14460620 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 15-441 |
| Cow position: | chr27:23334591-23335000 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 15-441 |
| Cow position: | chr27:25116673-25117080 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 313, 85 |
| Conread position: | 15-441 |
| Cow position: | chr27:26324242-26324651 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 15-474 |
| Cow position: | chr27:27662321-27662763 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 16-441 |
| Cow position: | chr27:25999627-25999222 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 286 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 179, 85 |
| Conread position: | 18-428 |
| Cow position: | chr27:25805448-25805057 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 89 |
| Conread position: | 18-441 |
| Cow position: | chr27:16034992-16034556 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 332 |
| Conread position: | 19-441 |
| Cow position: | chr27:2364141-2364588 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 19-441 |
| Cow position: | chr27:26556555-26556145 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 98-439 |
| Cow position: | chr27:15540825-15541163 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 104-441 |
| Cow position: | chr27:13897695-13898032 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 228 |
| Conread position: | 131-374 |
| Cow position: | chr27:16431999-16432242 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 36 |
| Conread position: | 134-436 |
| Cow position: | chr27:27051186-27051496 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 141-433 |
| Cow position: | chr27:5906572-5906853 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 83 |
| Conread position: | 165-330 |
| Cow position: | chr27:23930583-23930417 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 189-441 |
| Cow position: | chr27:25002948-25002694 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 123, 155 |
| Conread position: | 202-441 |
| Cow position: | chr27:15278467-15278226 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
Show alignments to all cow chromosomes.