Cow genome map

Conread name: Ss1.1-Pig1-122O09.5

Conread position: 1-342
Cow position: chr28:2990509-2990184 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 266, 94

Conread position: 1-399
Cow position: chr28:10619651-10619260 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 100

Conread position: 1-402
Cow position: chr28:5812161-5812552 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 97

Conread position: 1-429
Cow position: chr28:21325241-21325658 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 418, 94

Conread position: 1-433
Cow position: chr28:21358472-21358888 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 430, 96

Conread position: 2-429
Cow position: chr28:5796273-5796684 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 96

Conread position: 11-441
Cow position: chr28:2083071-2083485 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 11-441
Cow position: chr28:17387948-17388362 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 15-274
Cow position: chr28:12411047-12410781 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 82, 159

Conread position: 15-302
Cow position: chr28:5936493-5936762 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 15-326
Cow position: chr28:24667081-24667380 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 15-330
Cow position: chr28:1504112-1504411 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 69, 0

Conread position: 15-330
Cow position: chr28:15378543-15378244 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 69, 0

Conread position: 15-342
Cow position: chr28:5752689-5752378 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 69

Conread position: 15-345
Cow position: chr28:33251790-33252129 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 15-389
Cow position: chr28:5115601-5115251 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 15-429
Cow position: chr28:1387921-1387526 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 15-429
Cow position: chr28:26007506-26007898 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 287
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 276, 68

Conread position: 15-433
Cow position: chr28:10582510-10582112 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 416, 69

Conread position: 15-434
Cow position: chr28:8721991-8721570 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 129

Conread position: 15-434
Cow position: chr28:17668041-17667638 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 15-437
Cow position: chr28:22827526-22827929 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 280
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 80, 0

Conread position: 15-441
Cow position: chr28:1168693-1168283 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 15-441
Cow position: chr28:3193304-3192910 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 73

Conread position: 15-441
Cow position: chr28:7001473-7001869 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position: chr28:7816714-7817103 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 31

Conread position: 15-441
Cow position: chr28:14706196-14705791 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-447
Cow position: chr28:781868-782282 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 69

Conread position: 16-415
Cow position: chr28:12149801-12150175 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 17-362
Cow position: chr28:7790766-7790437 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 17-441
Cow position: chr28:13522206-13522608 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 18-330
Cow position: chr28:15035942-15035646 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 18-357
Cow position: chr28:488931-489287 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 75, 0

Conread position: 19-393
Cow position: chr28:1952584-1952966 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 191

Conread position: 19-441
Cow position: chr28:5565336-5565742 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 19-441
Cow position: chr28:13441435-13440996 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 19-441
Cow position: chr28:13459449-13459852 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 19-441
Cow position: chr28:15950423-15950862 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 19-441
Cow position: chr28:18089531-18089123 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 270
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 275, 79

Conread position: 19-441
Cow position: chr28:26426786-26426393 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 24-342
Cow position: chr28:7739734-7740037 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 60

Conread position: 27-441
Cow position: chr28:18520978-18520580 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 36-441
Cow position: chr28:32792887-32792498 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 88-441
Cow position: chr28:6780799-6780448 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 237
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 264, 228

Conread position: 98-441
Cow position: chr28:14750085-14750429 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 103-436
Cow position: chr28:34648492-34648808 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 230
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 198, 15

Conread position: 104-441
Cow position: chr28:8378110-8378445 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 291

Conread position: 104-441
Cow position: chr28:15920915-15920585 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 5, 15

Conread position: 104-441
Cow position: chr28:22261607-22261270 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 296

Conread position: 104-441
Cow position: chr28:29819115-29819451 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 116-441
Cow position: chr28:9155726-9155404 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 24, 62

Conread position: 120-441
Cow position: chr28:34593403-34593724 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 122-426
Cow position: chr28:18181782-18181490 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 176-441
Cow position: chr28:2591539-2591797 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 52, 0

Conread position: 176-441
Cow position: chr28:9953751-9954017 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 0

Conread position: 176-452
Cow position: chr28:15681509-15681781 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 0

Conread position: 194-342
Cow position: chr28:9137394-9137246 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 126

Conread position: 204-441
Cow position: chr28:1815223-1814987 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 206-441
Cow position: chr28:7901005-7901232 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 223-441
Cow position: chr28:24587099-24587314 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 71

Conread position: 235-400
Cow position: chr28:14491140-14491303 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 261-441
Cow position: chr28:4381108-4380938 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 0

Show alignments to all cow chromosomes.