Cow genome map
Conread name: | Ss1.1-Pig1-122O09.5 |
Conread position: | 1-342 |
Cow position: | chr28:2990509-2990184 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 240 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 266, 94 |
Conread position: | 1-399 |
Cow position: | chr28:10619651-10619260 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 100 |
Conread position: | 1-402 |
Cow position: | chr28:5812161-5812552 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 97 |
Conread position: | 1-429 |
Cow position: | chr28:21325241-21325658 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 418, 94 |
Conread position: | 1-433 |
Cow position: | chr28:21358472-21358888 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 430, 96 |
Conread position: | 2-429 |
Cow position: | chr28:5796273-5796684 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 96 |
Conread position: | 11-441 |
Cow position: | chr28:2083071-2083485 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 11-441 |
Cow position: | chr28:17387948-17388362 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 15-274 |
Cow position: | chr28:12411047-12410781 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 184 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 82, 159 |
Conread position: | 15-302 |
Cow position: | chr28:5936493-5936762 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 195 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-326 |
Cow position: | chr28:24667081-24667380 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 15-330 |
Cow position: | chr28:1504112-1504411 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 223 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-330 |
Cow position: | chr28:15378543-15378244 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 225 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-342 |
Cow position: | chr28:5752689-5752378 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 69 |
Conread position: | 15-345 |
Cow position: | chr28:33251790-33252129 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 15-389 |
Cow position: | chr28:5115601-5115251 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 15-429 |
Cow position: | chr28:1387921-1387526 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 15-429 |
Cow position: | chr28:26007506-26007898 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 287 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 276, 68 |
Conread position: | 15-433 |
Cow position: | chr28:10582510-10582112 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 416, 69 |
Conread position: | 15-434 |
Cow position: | chr28:8721991-8721570 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 129 |
Conread position: | 15-434 |
Cow position: | chr28:17668041-17667638 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 15-437 |
Cow position: | chr28:22827526-22827929 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 280 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 15-441 |
Cow position: | chr28:1168693-1168283 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 15-441 |
Cow position: | chr28:3193304-3192910 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 397, 73 |
Conread position: | 15-441 |
Cow position: | chr28:7001473-7001869 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-441 |
Cow position: | chr28:7816714-7817103 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 421, 31 |
Conread position: | 15-441 |
Cow position: | chr28:14706196-14705791 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 15-447 |
Cow position: | chr28:781868-782282 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 69 |
Conread position: | 16-415 |
Cow position: | chr28:12149801-12150175 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 17-362 |
Cow position: | chr28:7790766-7790437 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 17-441 |
Cow position: | chr28:13522206-13522608 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 18-330 |
Cow position: | chr28:15035942-15035646 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 18-357 |
Cow position: | chr28:488931-489287 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 245 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 19-393 |
Cow position: | chr28:1952584-1952966 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 270 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 31, 191 |
Conread position: | 19-441 |
Cow position: | chr28:5565336-5565742 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 19-441 |
Cow position: | chr28:13441435-13440996 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 19-441 |
Cow position: | chr28:13459449-13459852 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 19-441 |
Cow position: | chr28:15950423-15950862 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 19-441 |
Cow position: | chr28:18089531-18089123 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 270 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 275, 79 |
Conread position: | 19-441 |
Cow position: | chr28:26426786-26426393 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 24-342 |
Cow position: | chr28:7739734-7740037 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 277, 60 |
Conread position: | 27-441 |
Cow position: | chr28:18520978-18520580 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 36-441 |
Cow position: | chr28:32792887-32792498 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 88-441 |
Cow position: | chr28:6780799-6780448 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 237 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 264, 228 |
Conread position: | 98-441 |
Cow position: | chr28:14750085-14750429 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 103-436 |
Cow position: | chr28:34648492-34648808 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 230 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 198, 15 |
Conread position: | 104-441 |
Cow position: | chr28:8378110-8378445 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 291 |
Conread position: | 104-441 |
Cow position: | chr28:15920915-15920585 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 225 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 5, 15 |
Conread position: | 104-441 |
Cow position: | chr28:22261607-22261270 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 296 |
Conread position: | 104-441 |
Cow position: | chr28:29819115-29819451 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 116-441 |
Cow position: | chr28:9155726-9155404 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 235 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 24, 62 |
Conread position: | 120-441 |
Cow position: | chr28:34593403-34593724 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 122-426 |
Cow position: | chr28:18181782-18181490 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 203 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 176-441 |
Cow position: | chr28:2591539-2591797 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 194 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 176-441 |
Cow position: | chr28:9953751-9954017 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 0 |
Conread position: | 176-452 |
Cow position: | chr28:15681509-15681781 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 226, 0 |
Conread position: | 194-342 |
Cow position: | chr28:9137394-9137246 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 121, 126 |
Conread position: | 204-441 |
Cow position: | chr28:1815223-1814987 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 0 |
Conread position: | 206-441 |
Cow position: | chr28:7901005-7901232 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 173 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 223-441 |
Cow position: | chr28:24587099-24587314 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 155 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 22, 71 |
Conread position: | 235-400 |
Cow position: | chr28:14491140-14491303 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 121 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 261-441 |
Cow position: | chr28:4381108-4380938 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 141 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.