Cow genome map

Conread name: Ss1.1-Pig1-122O09.5

Conread position: 1-309
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 62, 45

Conread position: 1-327
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 1-421
Cow position:
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 82

Conread position: 1-435
Cow position:
Alignm length: 444
Alignm identity: 291
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 61

Conread position: 1-436
Cow position:
Alignm length: 446
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 33

Conread position: 1-440
Cow position:
Alignm length: 440
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 1-441
Cow position:
Alignm length: 443
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 83

Conread position: 1-445
Cow position:
Alignm length: 447
Alignm identity: 292
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 195, 51

Conread position: 11-441
Cow position:
Alignm length: 431
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 11-441
Cow position:
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 12-349
Cow position:
Alignm length: 338
Alignm identity: 224
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 15-298
Cow position:
Alignm length: 285
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 128, 69

Conread position: 15-316
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 67, 0

Conread position: 15-346
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 82, 92

Conread position: 15-398
Cow position:
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 15-429
Cow position:
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 15-433
Cow position:
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 416, 68

Conread position: 15-436
Cow position:
Alignm length: 439
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 293

Conread position: 15-439
Cow position:
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 15-439
Cow position:
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 429
Alignm identity: 296
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 134, 69

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 15-441
Cow position:
Alignm length: 437
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 17

Conread position: 15-441
Cow position:
Alignm length: 444
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 12

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 438
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 390

Conread position: 15-441
Cow position:
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 42

Conread position: 15-441
Cow position:
Alignm length: 444
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 15-441
Cow position:
Alignm length: 429
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 19

Conread position: 15-441
Cow position:
Alignm length: 429
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 395

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 69

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 69

Conread position: 15-442
Cow position:
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 16-398
Cow position:
Alignm length: 388
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 102

Conread position: 17-441
Cow position:
Alignm length: 425
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 18-435
Cow position:
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 66

Conread position: 18-441
Cow position:
Alignm length: 442
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 28

Conread position: 18-441
Cow position:
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 18-441
Cow position:
Alignm length: 442
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 243

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 393

Conread position: 18-441
Cow position:
Alignm length: 442
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 18-441
Cow position:
Alignm length: 439
Alignm identity: 295
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 80, 36

Conread position: 18-441
Cow position:
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 393

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 292
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 70, 279

Conread position: 19-396
Cow position:
Alignm length: 395
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 275

Conread position: 19-400
Cow position:
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 19-429
Cow position:
Alignm length: 411
Alignm identity: 283
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 19-436
Cow position:
Alignm length: 419
Alignm identity: 270
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 58, 81

Conread position: 19-441
Cow position:
Alignm length: 440
Alignm identity: 293
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 237

Conread position: 19-441
Cow position:
Alignm length: 439
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 152

Conread position: 19-441
Cow position:
Alignm length: 440
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 19-441
Cow position:
Alignm length: 440
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 168

Conread position: 19-441
Cow position:
Alignm length: 440
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 20-441
Cow position:
Alignm length: 447
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 313

Conread position: 22-441
Cow position:
Alignm length: 421
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 59

Conread position: 22-441
Cow position:
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 28-400
Cow position:
Alignm length: 375
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 67

Conread position: 35-441
Cow position:
Alignm length: 409
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 104

Conread position: 39-441
Cow position:
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 58

Conread position: 77-441
Cow position:
Alignm length: 366
Alignm identity: 248
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 318, 36

Conread position: 84-432
Cow position:
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 81

Conread position: 84-438
Cow position:
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 314

Conread position: 85-441
Cow position:
Alignm length: 357
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 91-402
Cow position:
Alignm length: 315
Alignm identity: 199
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 98-321
Cow position:
Alignm length: 225
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 194, 59

Conread position: 98-393
Cow position:
Alignm length: 296
Alignm identity: 203
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 98-441
Cow position:
Alignm length: 345
Alignm identity: 231
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 69, 74

Conread position: 98-441
Cow position:
Alignm length: 345
Alignm identity: 234
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 104, 188

Conread position: 98-441
Cow position:
Alignm length: 344
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 0

Conread position: 102-368
Cow position:
Alignm length: 267
Alignm identity: 179
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 102-441
Cow position:
Alignm length: 341
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 55

Conread position: 102-441
Cow position:
Alignm length: 340
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-432
Cow position:
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 222

Conread position: 103-441
Cow position:
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 276

Conread position: 104-441
Cow position:
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 0

Conread position: 104-441
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 107-400
Cow position:
Alignm length: 297
Alignm identity: 201
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 69

Conread position: 107-432
Cow position:
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 287

Conread position: 115-433
Cow position:
Alignm length: 323
Alignm identity: 207
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 44

Conread position: 116-436
Cow position:
Alignm length: 328
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 312

Conread position: 120-401
Cow position:
Alignm length: 282
Alignm identity: 207
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 0

Conread position: 120-441
Cow position:
Alignm length: 323
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 14

Conread position: 121-435
Cow position:
Alignm length: 327
Alignm identity: 209
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 173, 119

Conread position: 122-435
Cow position:
Alignm length: 316
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 46

Conread position: 123-437
Cow position:
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 130-435
Cow position:
Alignm length: 309
Alignm identity: 192
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 47

Conread position: 131-402
Cow position:
Alignm length: 276
Alignm identity: 194
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 34, 115

Conread position: 131-429
Cow position:
Alignm length: 300
Alignm identity: 204
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 33, 27

Conread position: 131-441
Cow position:
Alignm length: 314
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 132-441
Cow position:
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 110

Conread position: 133-441
Cow position:
Alignm length: 318
Alignm identity: 219
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 21, 61

Conread position: 134-435
Cow position:
Alignm length: 309
Alignm identity: 197
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 153

Conread position: 139-406
Cow position:
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 102, 0

Conread position: 141-377
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 142-441
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 261

Conread position: 142-441
Cow position:
Alignm length: 307
Alignm identity: 208
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 96, 34

Conread position: 151-441
Cow position:
Alignm length: 296
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 34

Conread position: 162-441
Cow position:
Alignm length: 281
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 239, 17

Conread position: 162-447
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 173

Conread position: 168-341
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 172-441
Cow position:
Alignm length: 272
Alignm identity: 189
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 0

Conread position: 176-441
Cow position:
Alignm length: 266
Alignm identity: 194
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 10, 0

Conread position: 184-441
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 187-433
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 204, 114

Conread position: 189-396
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 189-441
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 85, 0

Conread position: 194-441
Cow position:
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 127

Conread position: 194-441
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 194-441
Cow position:
Alignm length: 262
Alignm identity: 182
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 118, 46

Conread position: 198-441
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 201-441
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 205-441
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 236-441
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 160, 0

Conread position: 247-433
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 134, 52

Conread position: 255-441
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 15

Conread position: 269-433
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 162, 105

Conread position: 272-396
Cow position:
Alignm length: 125
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.