Cow genome map

Conread name: Ss1.1-Pig1-122O09.5

Conread position: 1-401
Cow position:
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 157

Conread position: 1-432
Cow position:
Alignm length: 437
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 94

Conread position: 1-434
Cow position:
Alignm length: 440
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 94

Conread position: 1-441
Cow position:
Alignm length: 442
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 61

Conread position: 2-192
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 2-399
Cow position:
Alignm length: 402
Alignm identity: 249
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 133

Conread position: 2-439
Cow position:
Alignm length: 440
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 93

Conread position: 2-441
Cow position:
Alignm length: 441
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 33

Conread position: 3-400
Cow position:
Alignm length: 400
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 92

Conread position: 7-441
Cow position:
Alignm length: 436
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 11-441
Cow position:
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 56

Conread position: 11-442
Cow position:
Alignm length: 432
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 15-286
Cow position:
Alignm length: 275
Alignm identity: 192
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 164, 68

Conread position: 15-317
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 286, 34

Conread position: 15-398
Cow position:
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 15-400
Cow position:
Alignm length: 405
Alignm identity: 273
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 73, 332

Conread position: 15-402
Cow position:
Alignm length: 388
Alignm identity: 265
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 83, 0

Conread position: 15-402
Cow position:
Alignm length: 402
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 37

Conread position: 15-426
Cow position:
Alignm length: 429
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 309

Conread position: 15-439
Cow position:
Alignm length: 428
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 235

Conread position: 15-440
Cow position:
Alignm length: 443
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 207

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 69

Conread position: 15-441
Cow position:
Alignm length: 429
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 34

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 275
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 216, 91

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 69

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 430
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 21

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-447
Cow position:
Alignm length: 433
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 15-447
Cow position:
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 17-307
Cow position:
Alignm length: 292
Alignm identity: 199
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 285, 78

Conread position: 18-400
Cow position:
Alignm length: 396
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 163

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 199

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 134

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 154

Conread position: 18-441
Cow position:
Alignm length: 442
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 394

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 208

Conread position: 18-441
Cow position:
Alignm length: 445
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 277

Conread position: 18-441
Cow position:
Alignm length: 443
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 133

Conread position: 18-441
Cow position:
Alignm length: 443
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 264

Conread position: 18-441
Cow position:
Alignm length: 424
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 19-389
Cow position:
Alignm length: 383
Alignm identity: 253
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 94, 163

Conread position: 19-429
Cow position:
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 19-436
Cow position:
Alignm length: 435
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 415

Conread position: 19-440
Cow position:
Alignm length: 441
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 19-440
Cow position:
Alignm length: 443
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 339

Conread position: 19-441
Cow position:
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 19-441
Cow position:
Alignm length: 423
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 19-441
Cow position:
Alignm length: 440
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 269

Conread position: 19-441
Cow position:
Alignm length: 440
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 19-441
Cow position:
Alignm length: 441
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 170

Conread position: 20-379
Cow position:
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 54

Conread position: 28-436
Cow position:
Alignm length: 409
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 34-441
Cow position:
Alignm length: 409
Alignm identity: 279
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 378, 49

Conread position: 35-441
Cow position:
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 49

Conread position: 38-402
Cow position:
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 90-441
Cow position:
Alignm length: 353
Alignm identity: 232
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 155

Conread position: 92-441
Cow position:
Alignm length: 352
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 68

Conread position: 97-441
Cow position:
Alignm length: 347
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 61

Conread position: 98-432
Cow position:
Alignm length: 342
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 297, 61

Conread position: 98-436
Cow position:
Alignm length: 339
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 98-441
Cow position:
Alignm length: 344
Alignm identity: 231
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 98-441
Cow position:
Alignm length: 345
Alignm identity: 232
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 61, 193

Conread position: 98-441
Cow position:
Alignm length: 344
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 98-441
Cow position:
Alignm length: 344
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 98-441
Cow position:
Alignm length: 350
Alignm identity: 237
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 50, 302

Conread position: 100-432
Cow position:
Alignm length: 342
Alignm identity: 225
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 197

Conread position: 101-330
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 0

Conread position: 102-433
Cow position:
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 33

Conread position: 103-441
Cow position:
Alignm length: 344
Alignm identity: 231
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 63

Conread position: 113-326
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 130, 51

Conread position: 113-441
Cow position:
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 10

Conread position: 122-429
Cow position:
Alignm length: 309
Alignm identity: 203
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 135, 35

Conread position: 128-432
Cow position:
Alignm length: 308
Alignm identity: 196
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 26

Conread position: 132-436
Cow position:
Alignm length: 312
Alignm identity: 204
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 35, 121

Conread position: 141-441
Cow position:
Alignm length: 301
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 151-441
Cow position:
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 12

Conread position: 151-441
Cow position:
Alignm length: 292
Alignm identity: 209
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 7, 15

Conread position: 161-441
Cow position:
Alignm length: 292
Alignm identity: 191
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 140

Conread position: 163-400
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 144, 0

Conread position: 168-402
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 117

Conread position: 168-435
Cow position:
Alignm length: 270
Alignm identity: 179
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 130, 104

Conread position: 168-436
Cow position:
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 149

Conread position: 170-441
Cow position:
Alignm length: 272
Alignm identity: 192
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 176-436
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 243

Conread position: 176-441
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 117

Conread position: 176-441
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 39

Conread position: 176-441
Cow position:
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 0

Conread position: 193-441
Cow position:
Alignm length: 249
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 194-402
Cow position:
Alignm length: 209
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 194-441
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 106, 0

Conread position: 195-441
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 210

Conread position: 210-441
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 217-441
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 252-441
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 256-434
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 283-441
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 286-441
Cow position:
Alignm length: 156
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 291-441
Cow position:
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.