Cow genome map

Conread name: Ss1.1-Pig1-122O09.5

Conread position: 1-441
Cow position:
Alignm length: 443
Alignm identity: 278
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 266, 22

Conread position: 2-338
Cow position:
Alignm length: 338
Alignm identity: 233
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 330, 93

Conread position: 4-441
Cow position:
Alignm length: 438
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 11-441
Cow position:
Alignm length: 431
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 15-358
Cow position:
Alignm length: 345
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 69

Conread position: 15-436
Cow position:
Alignm length: 434
Alignm identity: 287
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 73, 271

Conread position: 15-436
Cow position:
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 82

Conread position: 15-439
Cow position:
Alignm length: 432
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 58

Conread position: 15-439
Cow position:
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 69

Conread position: 15-441
Cow position:
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 69

Conread position: 15-441
Cow position:
Alignm length: 429
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 69

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 284
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 70

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 69

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 69

Conread position: 15-441
Cow position:
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 70

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 15-441
Cow position:
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 65

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 446
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 381

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position:
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-446
Cow position:
Alignm length: 433
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 69

Conread position: 15-447
Cow position:
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 17-441
Cow position:
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 18-441
Cow position:
Alignm length: 432
Alignm identity: 279
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 104, 66

Conread position: 18-441
Cow position:
Alignm length: 425
Alignm identity: 290
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 323, 88

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 154

Conread position: 18-441
Cow position:
Alignm length: 442
Alignm identity: 292
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 186

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 18-441
Cow position:
Alignm length: 441
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 154

Conread position: 19-427
Cow position:
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 19-441
Cow position:
Alignm length: 440
Alignm identity: 290
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 155

Conread position: 19-441
Cow position:
Alignm length: 429
Alignm identity: 279
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 111, 42

Conread position: 19-441
Cow position:
Alignm length: 448
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 169

Conread position: 19-441
Cow position:
Alignm length: 441
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 226

Conread position: 19-441
Cow position:
Alignm length: 442
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 290

Conread position: 19-442
Cow position:
Alignm length: 427
Alignm identity: 269
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 20

Conread position: 38-436
Cow position:
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 392

Conread position: 38-441
Cow position:
Alignm length: 406
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 45

Conread position: 84-429
Cow position:
Alignm length: 347
Alignm identity: 175
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 0

Conread position: 90-441
Cow position:
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 256

Conread position: 92-402
Cow position:
Alignm length: 312
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 11

Conread position: 94-393
Cow position:
Alignm length: 305
Alignm identity: 196
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 9

Conread position: 97-435
Cow position:
Alignm length: 340
Alignm identity: 207
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 315, 21

Conread position: 97-441
Cow position:
Alignm length: 348
Alignm identity: 232
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 84, 300

Conread position: 98-429
Cow position:
Alignm length: 332
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 98-441
Cow position:
Alignm length: 344
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 98-441
Cow position:
Alignm length: 344
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 0

Conread position: 98-441
Cow position:
Alignm length: 346
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 111

Conread position: 98-441
Cow position:
Alignm length: 344
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 99-441
Cow position:
Alignm length: 343
Alignm identity: 219
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 102-441
Cow position:
Alignm length: 340
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 103-441
Cow position:
Alignm length: 342
Alignm identity: 221
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 184, 99

Conread position: 104-430
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 9, 177

Conread position: 104-441
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 0

Conread position: 104-441
Cow position:
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 107-435
Cow position:
Alignm length: 331
Alignm identity: 211
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 60

Conread position: 107-441
Cow position:
Alignm length: 338
Alignm identity: 226
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 248, 48

Conread position: 109-441
Cow position:
Alignm length: 335
Alignm identity: 224
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 270, 17

Conread position: 113-441
Cow position:
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 130-441
Cow position:
Alignm length: 320
Alignm identity: 208
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 175, 199

Conread position: 140-441
Cow position:
Alignm length: 304
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 59, 16

Conread position: 142-441
Cow position:
Alignm length: 303
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 98

Conread position: 142-441
Cow position:
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 151-441
Cow position:
Alignm length: 291
Alignm identity: 197
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 160-441
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 19

Conread position: 162-341
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 162-402
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 17, 0

Conread position: 168-429
Cow position:
Alignm length: 263
Alignm identity: 193
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 149

Conread position: 171-441
Cow position:
Alignm length: 271
Alignm identity: 190
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 119, 0

Conread position: 176-441
Cow position:
Alignm length: 270
Alignm identity: 192
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 131, 0

Conread position: 178-400
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 7

Conread position: 180-441
Cow position:
Alignm length: 263
Alignm identity: 184
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 251, 120

Conread position: 186-398
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 188-441
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 151, 50

Conread position: 188-441
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 63, 101

Conread position: 189-430
Cow position:
Alignm length: 242
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 189-441
Cow position:
Alignm length: 253
Alignm identity: 168
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 215, 0

Conread position: 190-430
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 117, 141

Conread position: 193-367
Cow position:
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 108, 41

Conread position: 200-439
Cow position:
Alignm length: 240
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 194, 0

Conread position: 202-400
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 76

Conread position: 203-441
Cow position:
Alignm length: 239
Alignm identity: 169
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 93, 0

Conread position: 205-402
Cow position:
Alignm length: 198
Alignm identity: 152
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 80, 0

Conread position: 210-441
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 190

Conread position: 257-429
Cow position:
Alignm length: 173
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 263-428
Cow position:
Alignm length: 170
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Show alignments to all cow chromosomes.