Cow genome map
| Conread name: | Ss1.1-Pig2-40F20.5 |
| Conread position: | 1-218 |
| Cow position: | chr1:102505593-102505811 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 92 |
| Conread position: | 1-220 |
| Cow position: | chr1:79743283-79743513 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 78, 105 |
| Conread position: | 1-224 |
| Cow position: | chr1:52394234-52394013 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 93 |
| Conread position: | 1-283 |
| Cow position: | chr1:52388884-52388596 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 218 |
| Conread position: | 1-324 |
| Cow position: | chr1:26406842-26406512 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 93 |
| Conread position: | 4-233 |
| Cow position: | chr1:79626896-79626673 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 131, 78 |
| Conread position: | 5-220 |
| Cow position: | chr1:49739062-49739273 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 145, 89 |
| Conread position: | 5-233 |
| Cow position: | chr1:17488351-17488112 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 8-216 |
| Cow position: | chr1:12040477-12040682 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 7 |
| Conread position: | 9-230 |
| Cow position: | chr1:42182389-42182620 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 69, 96 |
| Conread position: | 13-232 |
| Cow position: | chr1:92612383-92612611 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 129 |
| Conread position: | 13-233 |
| Cow position: | chr1:87946743-87946512 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 13-324 |
| Cow position: | chr1:5192347-5192031 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 15-233 |
| Cow position: | chr1:100754006-100753778 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 63-280 |
| Cow position: | chr1:98297147-98296939 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 77-219 |
| Cow position: | chr1:32350677-32350538 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 75, 18 |
| Conread position: | 77-232 |
| Cow position: | chr1:82516015-82516169 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 18 |
| Conread position: | 79-195 |
| Cow position: | chr1:39506771-39506654 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 104-282 |
| Cow position: | chr1:29838146-29838316 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 104-282 |
| Cow position: | chr1:39060354-39060524 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 46, 22 |
Show alignments to all cow chromosomes.