Cow genome map
| Conread name: | Ss1.1-Pig2-40F20.5 |
| Conread position: | 1-221 |
| Cow position: | chr11:48257183-48257415 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 78, 156 |
| Conread position: | 3-228 |
| Cow position: | chr11:65879253-65879020 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 103 |
| Conread position: | 3-232 |
| Cow position: | chr11:38210705-38210468 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 37, 46 |
| Conread position: | 9-231 |
| Cow position: | chr11:372253-372017 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 44, 97 |
| Conread position: | 10-232 |
| Cow position: | chr11:40540457-40540221 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 70, 117 |
| Conread position: | 13-221 |
| Cow position: | chr11:52074685-52074469 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 39, 89 |
| Conread position: | 13-232 |
| Cow position: | chr11:32815843-32816072 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 92 |
| Conread position: | 13-232 |
| Cow position: | chr11:71359207-71359439 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 24-245 |
| Cow position: | chr11:48258846-48259079 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 77-231 |
| Cow position: | chr11:65957225-65957380 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 147 |
| Conread position: | 82-210 |
| Cow position: | chr11:8555819-8555692 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 18 |
| Conread position: | 104-279 |
| Cow position: | chr11:76534067-76534239 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 104-282 |
| Cow position: | chr11:21512281-21512454 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 29 |
Show alignments to all cow chromosomes.