Cow genome map


           Conread name:
           Ss1.1-Pig2-40F20.5
        

               Conread position:
               1-93
               

               Cow position:
               chr16:15227804-15227712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-324
               

               Cow position:
               chr16:9479988-9479686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 65
               

               Conread position:
               9-233
               

               Cow position:
               chr16:48940533-48940768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               66, 165
               

               Conread position:
               13-232
               

               Cow position:
               chr16:9749520-9749739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               65, 116
               

               Conread position:
               15-231
               

               Cow position:
               chr16:19463974-19463762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               136, 85
               

               Conread position:
               16-232
               

               Cow position:
               chr16:9521781-9522005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               57, 89
               

               Conread position:
               20-314
               

               Cow position:
               chr16:31533060-31533366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               25, 32
               

               Conread position:
               73-281
               

               Cow position:
               chr16:54481091-54481299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               77-233
               

               Cow position:
               chr16:34136345-34136500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               79-216
               

               Cow position:
               chr16:6532027-6531890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               71, 20
               

               Conread position:
               84-210
               

               Cow position:
               chr16:4442851-4442979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               96-323
               

               Cow position:
               chr16:15227207-15226986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               56, 65
               
Show alignments to all cow chromosomes.