Cow genome map


           Conread name:
           Ss1.1-Pig2-40F20.5
        

               Conread position:
               1-156
               

               Cow position:
               chr24:13915632-13915477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               149, 93
               

               Conread position:
               1-281
               

               Cow position:
               chr24:18383781-18383512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 93
               

               Conread position:
               3-250
               

               Cow position:
               chr24:43623083-43622831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 104
               

               Conread position:
               8-228
               

               Cow position:
               chr24:171755-171535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 92
               

               Conread position:
               10-324
               

               Cow position:
               chr24:27477901-27477570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 96
               

               Conread position:
               13-234
               

               Cow position:
               chr24:15802665-15802436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 92
               

               Conread position:
               77-198
               

               Cow position:
               chr24:15074779-15074900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               77-216
               

               Cow position:
               chr24:21620172-21620036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               78-282
               

               Cow position:
               chr24:16505228-16505028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               99-230
               

               Cow position:
               chr24:42211023-42211152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 47
               

               Conread position:
               104-280
               

               Cow position:
               chr24:44382127-44381950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               48, 90
               

               Conread position:
               104-324
               

               Cow position:
               chr24:33070682-33070905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               47, 23
               
Show alignments to all cow chromosomes.