Cow genome map


           Conread name:
           Ss1.1-Pig2-40F20.5
        

               Conread position:
               1-181
               

               Cow position:
               chr28:7629151-7628960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 104
               

               Conread position:
               1-231
               

               Cow position:
               chr28:18603744-18603515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               150, 81
               

               Conread position:
               1-234
               

               Cow position:
               chr28:5861901-5862145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               1-324
               

               Cow position:
               chr28:7624175-7623851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 93
               

               Conread position:
               3-229
               

               Cow position:
               chr28:4216955-4217186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               12, 89
               

               Conread position:
               3-231
               

               Cow position:
               chr28:3702491-3702724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               4-234
               

               Cow position:
               chr28:10199779-10199547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 80
               

               Conread position:
               10-245
               

               Cow position:
               chr28:11266449-11266203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               70, 101
               

               Conread position:
               10-281
               

               Cow position:
               chr28:29648174-29648421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               257, 69
               

               Conread position:
               13-232
               

               Cow position:
               chr28:732636-732859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               60, 34
               

               Conread position:
               13-245
               

               Cow position:
               chr28:5218983-5219222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               67, 96
               

               Conread position:
               85-231
               

               Cow position:
               chr28:5232150-5232291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               65, 7
               
Show alignments to all cow chromosomes.