Cow genome map
| Conread name: | Ss1.1-Pig2-40F20.5 |
| Conread position: | 1-91 |
| Cow position: | chr3:60009442-60009352 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 80 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-233 |
| Cow position: | chr3:71209260-71209506 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 44, 108 |
| Conread position: | 1-265 |
| Cow position: | chr3:58549318-58549563 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 121, 93 |
| Conread position: | 1-278 |
| Cow position: | chr3:83488942-83489225 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 104 |
| Conread position: | 1-322 |
| Cow position: | chr3:60026600-60026282 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 21 |
| Conread position: | 1-324 |
| Cow position: | chr3:31815708-31816032 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 2-232 |
| Cow position: | chr3:60013142-60012916 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 150, 40 |
| Conread position: | 3-237 |
| Cow position: | chr3:83962983-83963227 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 70, 16 |
| Conread position: | 3-257 |
| Cow position: | chr3:81267413-81267152 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 10 |
| Conread position: | 5-221 |
| Cow position: | chr3:12129889-12130116 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 73, 100 |
| Conread position: | 13-162 |
| Cow position: | chr3:83965006-83964849 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 13-230 |
| Cow position: | chr3:59559877-59560104 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 62, 92 |
| Conread position: | 13-250 |
| Cow position: | chr3:66133264-66133513 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 13-324 |
| Cow position: | chr3:58244885-58244582 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 138, 60 |
| Conread position: | 27-283 |
| Cow position: | chr3:29144744-29145009 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 52, 207 |
| Conread position: | 78-231 |
| Cow position: | chr3:39155443-39155291 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 73, 22 |
| Conread position: | 83-324 |
| Cow position: | chr3:60009227-60008987 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 68, 12 |
| Conread position: | 104-324 |
| Cow position: | chr3:35958366-35958591 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 59 |
Show alignments to all cow chromosomes.