Cow genome map
| Conread name: | Ss1.1-Pig2-40F20.5 |
| Conread position: | 1-210 |
| Cow position: | chr5:38410752-38410953 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 149, 72 |
| Conread position: | 1-221 |
| Cow position: | chr5:50225881-50226112 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 72, 104 |
| Conread position: | 1-282 |
| Cow position: | chr5:75183796-75183515 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 115, 84 |
| Conread position: | 2-232 |
| Cow position: | chr5:17682793-17682551 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 77, 103 |
| Conread position: | 3-232 |
| Cow position: | chr5:58760731-58760971 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 70, 102 |
| Conread position: | 4-277 |
| Cow position: | chr5:48193664-48193930 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 50 |
| Conread position: | 13-197 |
| Cow position: | chr5:43115462-43115656 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 13-204 |
| Cow position: | chr5:69535218-69535017 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 45, 97 |
| Conread position: | 13-220 |
| Cow position: | chr5:44551904-44552104 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 51, 61 |
| Conread position: | 13-322 |
| Cow position: | chr5:56621400-56621728 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 15-282 |
| Cow position: | chr5:47859129-47859393 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 78 |
| Conread position: | 47-251 |
| Cow position: | chr5:57083104-57083304 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 180, 26 |
| Conread position: | 79-231 |
| Cow position: | chr5:43440585-43440734 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 16 |
| Conread position: | 95-222 |
| Cow position: | chr5:23758189-23758061 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 106-324 |
| Cow position: | chr5:48191071-48190848 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 44, 85 |
Show alignments to all cow chromosomes.