Cow genome map
| Conread name: | Ss1.1-Pig2-41E19.5 |
| Conread position: | 299-627 |
| Cow position: | chr11:83911516-83911189 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 9, 140 |
| Conread position: | 299-665 |
| Cow position: | chr11:71329723-71330093 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 13, 142 |
| Conread position: | 307-602 |
| Cow position: | chr11:50360672-50360382 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 62, 5 |
| Conread position: | 316-662 |
| Cow position: | chr11:28054457-28054112 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 316-665 |
| Cow position: | chr11:11988266-11988612 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 316-665 |
| Cow position: | chr11:26124769-26124426 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 316-665 |
| Cow position: | chr11:41170534-41170195 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 215, 15 |
| Conread position: | 316-665 |
| Cow position: | chr11:44157094-44156747 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 144, 15 |
| Conread position: | 316-665 |
| Cow position: | chr11:44251951-44252300 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 318-635 |
| Cow position: | chr11:41084740-41084423 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 318-650 |
| Cow position: | chr11:1997374-1997051 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 325-712 |
| Cow position: | chr11:21012123-21011741 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 138, 236 |
| Conread position: | 327-707 |
| Cow position: | chr11:7291383-7291010 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 172, 35 |
| Conread position: | 332-665 |
| Cow position: | chr11:63655171-63654836 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 127, 150 |
| Conread position: | 332-669 |
| Cow position: | chr11:64081917-64081574 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 128, 150 |
| Conread position: | 333-662 |
| Cow position: | chr11:23478481-23478816 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 129, 305 |
| Conread position: | 333-719 |
| Cow position: | chr11:9763569-9763201 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 153, 43 |
| Conread position: | 339-665 |
| Cow position: | chr11:12358244-12357916 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 339-665 |
| Cow position: | chr11:58134567-58134894 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 339-668 |
| Cow position: | chr11:29668436-29668105 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 121, 212 |
| Conread position: | 344-662 |
| Cow position: | chr11:53431884-53431561 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 105 |
| Conread position: | 355-656 |
| Cow position: | chr11:38557831-38557527 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 109, 42 |
| Conread position: | 356-667 |
| Cow position: | chr11:35387381-35387075 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 87, 9 |
| Conread position: | 372-672 |
| Cow position: | chr11:69101105-69101405 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 87, 147 |
| Conread position: | 401-667 |
| Cow position: | chr11:36304974-36304702 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 60, 236 |
| Conread position: | 413-610 |
| Cow position: | chr11:35505300-35505101 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 141 |
Show alignments to all cow chromosomes.