Cow genome map
| Conread name: | Ss1.1-Pig2-41E19.5 |
| Conread position: | 299-603 |
| Cow position: | chr15:47261537-47261837 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 303-605 |
| Cow position: | chr15:41322567-41322255 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 309-665 |
| Cow position: | chr15:24295190-24295543 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 316-663 |
| Cow position: | chr15:18576815-18577158 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 135, 15 |
| Conread position: | 316-665 |
| Cow position: | chr15:6155847-6155498 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 316-665 |
| Cow position: | chr15:6553718-6553376 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 316-665 |
| Cow position: | chr15:19737951-19737604 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 316-665 |
| Cow position: | chr15:21665644-21665300 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 316-669 |
| Cow position: | chr15:44828896-44829254 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 144, 19 |
| Conread position: | 316-671 |
| Cow position: | chr15:53137124-53136769 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 135, 15 |
| Conread position: | 316-675 |
| Cow position: | chr15:2076749-2077105 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 317-661 |
| Cow position: | chr15:3261231-3260877 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 317-669 |
| Cow position: | chr15:32494284-32493935 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 134, 18 |
| Conread position: | 318-725 |
| Cow position: | chr15:18258786-18258383 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 136, 20 |
| Conread position: | 325-755 |
| Cow position: | chr15:52716049-52716482 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 20, 156 |
| Conread position: | 329-654 |
| Cow position: | chr15:8057405-8057731 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 131, 234 |
| Conread position: | 332-665 |
| Cow position: | chr15:36971031-36971362 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 95, 123 |
| Conread position: | 332-680 |
| Cow position: | chr15:1772608-1772960 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 128, 150 |
| Conread position: | 333-565 |
| Cow position: | chr15:13421270-13421038 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 196, 218 |
| Conread position: | 333-577 |
| Cow position: | chr15:33644687-33644447 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 201, 122 |
| Conread position: | 333-705 |
| Cow position: | chr15:42457510-42457154 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 260 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 337-635 |
| Cow position: | chr15:33316237-33315934 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 123, 173 |
| Conread position: | 339-605 |
| Cow position: | chr15:18069376-18069122 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 339-680 |
| Cow position: | chr15:4142701-4142355 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 143 |
| Conread position: | 351-666 |
| Cow position: | chr15:30733095-30732783 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 10, 145 |
| Conread position: | 358-730 |
| Cow position: | chr15:22241122-22240759 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 40, 160 |
| Conread position: | 372-648 |
| Cow position: | chr15:35719283-35719007 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 162, 74 |
| Conread position: | 459-635 |
| Cow position: | chr15:5207133-5207312 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 101 |
Show alignments to all cow chromosomes.