Cow genome map
| Conread name: | Ss1.1-Pig2-41E19.5 |
| Conread position: | 262-671 |
| Cow position: | chr16:44867797-44867388 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 53, 21 |
| Conread position: | 267-665 |
| Cow position: | chr16:29046724-29047125 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 276-665 |
| Cow position: | chr16:40296470-40296074 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 36, 174 |
| Conread position: | 316-665 |
| Cow position: | chr16:2483386-2483037 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 316-665 |
| Cow position: | chr16:2727533-2727185 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 135, 15 |
| Conread position: | 316-665 |
| Cow position: | chr16:25441381-25441729 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 316-665 |
| Cow position: | chr16:25457710-25457361 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 316-665 |
| Cow position: | chr16:31592159-31591817 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 318-725 |
| Cow position: | chr16:9444018-9443621 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 52 |
| Conread position: | 321-597 |
| Cow position: | chr16:47571393-47571122 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 139, 10 |
| Conread position: | 324-625 |
| Cow position: | chr16:33012468-33012761 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 24 |
| Conread position: | 332-680 |
| Cow position: | chr16:28197911-28197557 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 152 |
| Conread position: | 333-623 |
| Cow position: | chr16:28867382-28867093 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 126, 55 |
| Conread position: | 333-671 |
| Cow position: | chr16:21809547-21809883 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 128, 17 |
| Conread position: | 333-671 |
| Cow position: | chr16:30070368-30070704 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 65, 117 |
| Conread position: | 336-671 |
| Cow position: | chr16:19235713-19235387 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 339-665 |
| Cow position: | chr16:5661618-5661946 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 210 |
| Conread position: | 339-707 |
| Cow position: | chr16:23721854-23721494 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 348-604 |
| Cow position: | chr16:13873681-13873940 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 360-665 |
| Cow position: | chr16:1567657-1567350 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 89, 191 |
| Conread position: | 360-665 |
| Cow position: | chr16:28377013-28377320 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 76 |
| Conread position: | 365-665 |
| Cow position: | chr16:18757575-18757273 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 171, 187 |
| Conread position: | 366-671 |
| Cow position: | chr16:13409712-13410015 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 91, 168 |
| Conread position: | 375-650 |
| Cow position: | chr16:14466018-14466294 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 84, 182 |
| Conread position: | 395-635 |
| Cow position: | chr16:216958-216717 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 136, 76 |
| Conread position: | 395-712 |
| Cow position: | chr16:20134255-20133950 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 121 |
Show alignments to all cow chromosomes.