Cow genome map
| Conread name: | Ss1.1-Pig2-41E19.5 |
| Conread position: | 272-705 |
| Cow position: | chr18:8643484-8643901 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 273-705 |
| Cow position: | chr18:25961924-25961504 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 91, 18 |
| Conread position: | 310-665 |
| Cow position: | chr18:28973357-28973001 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 316-665 |
| Cow position: | chr18:14130931-14131276 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 316-665 |
| Cow position: | chr18:16176076-16175731 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 316-665 |
| Cow position: | chr18:27837776-27837427 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 316-671 |
| Cow position: | chr18:40478923-40479279 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 135, 15 |
| Conread position: | 318-582 |
| Cow position: | chr18:10036305-10036041 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 141, 14 |
| Conread position: | 318-665 |
| Cow position: | chr18:14420701-14421039 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 143, 13 |
| Conread position: | 319-617 |
| Cow position: | chr18:29746566-29746271 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 170, 12 |
| Conread position: | 323-671 |
| Cow position: | chr18:20693610-20693270 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 325-654 |
| Cow position: | chr18:5655903-5656209 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 332-665 |
| Cow position: | chr18:11274558-11274223 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 128, 150 |
| Conread position: | 332-665 |
| Cow position: | chr18:24040177-24039842 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 128, 217 |
| Conread position: | 332-680 |
| Cow position: | chr18:33953029-33952679 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 128, 150 |
| Conread position: | 336-665 |
| Cow position: | chr18:21148936-21148610 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 336-678 |
| Cow position: | chr18:23824753-23825092 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 195, 12 |
| Conread position: | 339-606 |
| Cow position: | chr18:37527182-37527443 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 339-680 |
| Cow position: | chr18:19352926-19353272 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 143 |
| Conread position: | 344-665 |
| Cow position: | chr18:14416541-14416868 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 106 |
| Conread position: | 372-725 |
| Cow position: | chr18:17197817-17197474 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 87, 20 |
| Conread position: | 380-706 |
| Cow position: | chr18:39077950-39078270 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 98 |
Show alignments to all cow chromosomes.