Cow genome map

Conread name: Ss1.1-Pig2-41E19.5

Conread position: 268-659
Cow position: chrX:27622003-27621607 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 253
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 93

Conread position: 269-665
Cow position: chrX:15179234-15178831 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 255
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 55

Conread position: 269-669
Cow position: chrX:982855-983264 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 257
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 27

Conread position: 274-680
Cow position: chrX:17478224-17477813 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 227
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 186, 208

Conread position: 299-663
Cow position: chrX:15119540-15119178 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 231
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 24

Conread position: 299-672
Cow position: chrX:37332430-37332801 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 262
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 264

Conread position: 312-592
Cow position: chrX:19726995-19726713 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 21

Conread position: 316-662
Cow position: chrX:2482384-2482039 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 233
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 15

Conread position: 316-665
Cow position: chrX:320715-321062 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 226
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 15

Conread position: 316-665
Cow position: chrX:971020-971369 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 235
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 15

Conread position: 316-665
Cow position: chrX:13412887-13412538 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 228
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 15

Conread position: 316-665
Cow position: chrX:16699552-16699899 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 228
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 135, 15

Conread position: 316-665
Cow position: chrX:29096453-29096799 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 226
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 15

Conread position: 316-665
Cow position: chrX:30711835-30712184 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 228
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 135, 15

Conread position: 316-665
Cow position: chrX:31198692-31199044 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 222
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 135, 15

Conread position: 316-674
Cow position: chrX:20720235-20720594 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 236
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 135, 15

Conread position: 316-680
Cow position: chrX:1547226-1547588 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 239
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 144, 15

Conread position: 317-665
Cow position: chrX:15599217-15599559 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 14

Conread position: 318-672
Cow position: chrX:2765594-2765949 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 45, 13

Conread position: 322-671
Cow position: chrX:17491711-17491363 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 233
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 10

Conread position: 325-575
Cow position: chrX:7550265-7550023 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 28

Conread position: 325-733
Cow position: chrX:13001783-13001372 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 260
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 37

Conread position: 326-597
Cow position: chrX:4416922-4417195 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 24

Conread position: 331-753
Cow position: chrX:8940495-8940089 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 5

Conread position: 332-665
Cow position: chrX:13076438-13076104 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 213
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 128, 150

Conread position: 332-665
Cow position: chrX:13097012-13096678 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 214
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 128, 150

Conread position: 332-665
Cow position: chrX:31493679-31494012 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 210
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 142

Conread position: 332-680
Cow position: chrX:12353499-12353852 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 225
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 128, 150

Conread position: 333-521
Cow position: chrX:7407222-7407032 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 150

Conread position: 333-567
Cow position: chrX:1068296-1068535 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 163

Conread position: 333-730
Cow position: chrX:34246519-34246131 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 260
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 16

Conread position: 336-530
Cow position: chrX:36268325-36268512 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 336-636
Cow position: chrX:33801260-33801565 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 69, 46

Conread position: 336-659
Cow position: chrX:29119706-29120030 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 46, 27

Conread position: 336-667
Cow position: chrX:7305959-7306287 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 235
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 178, 13

Conread position: 336-671
Cow position: chrX:25612030-25612365 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 221
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 124, 158

Conread position: 337-665
Cow position: chrX:12062774-12063108 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 46

Conread position: 338-601
Cow position: chrX:27602625-27602882 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 10

Conread position: 338-658
Cow position: chrX:1555922-1555598 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 218
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 55

Conread position: 338-671
Cow position: chrX:20794616-20794282 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 15

Conread position: 339-616
Cow position: chrX:24523041-24523320 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 115, 48

Conread position: 339-665
Cow position: chrX:7752165-7752500 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 212
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 121, 210

Conread position: 339-665
Cow position: chrX:21829797-21830125 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 8

Conread position: 343-672
Cow position: chrX:3014697-3015016 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 54

Conread position: 347-711
Cow position: chrX:27495195-27495560 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 238
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 101

Conread position: 358-680
Cow position: chrX:5863682-5864006 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 209
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 124, 100

Conread position: 367-717
Cow position: chrX:6198811-6198470 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 92, 138

Conread position: 401-672
Cow position: chrX:24616104-24615838 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 77

Conread position: 753-902
Cow position: chrX:8940126-8939973 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Show alignments to all cow chromosomes.