Cow genome map
Conread name: | Ss1.1-Pig2-5O09.5 |
Conread position: | 354-594 |
Cow position: | chr1:98413027-98412792 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 357-579 |
Cow position: | chr1:638197-638422 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 177 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 87, 162 |
Conread position: | 357-589 |
Cow position: | chr1:98880005-98879773 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 182 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 57, 76 |
Conread position: | 357-594 |
Cow position: | chr1:75184940-75185173 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 0 |
Conread position: | 357-595 |
Cow position: | chr1:5655430-5655197 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 358-486 |
Cow position: | chr1:84245729-84245599 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 358-489 |
Cow position: | chr1:77949197-77949328 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 98 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 358-493 |
Cow position: | chr1:47365262-47365397 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 112 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 358-510 |
Cow position: | chr1:30086399-30086250 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 123 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 358-512 |
Cow position: | chr1:81642196-81642043 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 123 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 48, 92 |
Conread position: | 358-519 |
Cow position: | chr1:17635018-17634855 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 129 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 358-566 |
Cow position: | chr1:83120655-83120859 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 154 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 97, 90 |
Conread position: | 358-594 |
Cow position: | chr1:32496217-32496440 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 180 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 358-594 |
Cow position: | chr1:78027847-78027613 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 134 |
Conread position: | 359-507 |
Cow position: | chr1:77942862-77942715 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 116 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 359-614 |
Cow position: | chr1:32501154-32501407 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 184 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 52, 88 |
Conread position: | 360-503 |
Cow position: | chr1:31978421-31978551 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 114 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 360-526 |
Cow position: | chr1:100140333-100140501 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 131 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 360-588 |
Cow position: | chr1:79839699-79839483 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 169 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 175, 16 |
Conread position: | 360-592 |
Cow position: | chr1:57267133-57266908 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 171 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 175, 16 |
Conread position: | 360-593 |
Cow position: | chr1:91026055-91026276 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 187 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 205, 36 |
Conread position: | 360-594 |
Cow position: | chr1:39297485-39297712 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 173 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 214, 36 |
Conread position: | 361-589 |
Cow position: | chr1:87757559-87757341 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 170 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 115, 43 |
Conread position: | 361-589 |
Cow position: | chr1:88767875-88768092 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 169 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 115, 43 |
Conread position: | 362-489 |
Cow position: | chr1:29107492-29107365 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 110 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 362-582 |
Cow position: | chr1:32964877-32965097 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 167 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 209, 196 |
Conread position: | 362-587 |
Cow position: | chr1:32284692-32284906 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 176 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 13, 20 |
Conread position: | 364-572 |
Cow position: | chr1:55117761-55117968 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 164 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 0 |
Conread position: | 364-594 |
Cow position: | chr1:29099871-29099641 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 170 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 198, 209 |
Conread position: | 365-594 |
Cow position: | chr1:89776832-89776607 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 366-589 |
Cow position: | chr1:93431149-93431352 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 172 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 366-593 |
Cow position: | chr1:35434745-35434963 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 172 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 58, 42 |
Conread position: | 366-594 |
Cow position: | chr1:48321584-48321366 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 176 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 99, 105 |
Conread position: | 369-473 |
Cow position: | chr1:16523567-16523671 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 87 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 369-594 |
Cow position: | chr1:80315093-80315314 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 169 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 383-555 |
Cow position: | chr1:64752818-64752987 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 137 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 383-594 |
Cow position: | chr1:101441119-101440914 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 160 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 388-544 |
Cow position: | chr1:95063613-95063766 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 117 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 403-655 |
Cow position: | chr1:13246416-13246664 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 178 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 170, 111 |
Conread position: | 403-708 |
Cow position: | chr1:33647340-33647023 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 219 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 61, 147 |
Conread position: | 406-589 |
Cow position: | chr1:33881039-33881222 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 140 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 406-589 |
Cow position: | chr1:76596141-76596323 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 149 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 407-556 |
Cow position: | chr1:74766459-74766607 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 113 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 415-594 |
Cow position: | chr1:23297669-23297845 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 166, 85 |
Conread position: | 420-593 |
Cow position: | chr1:11336013-11335840 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 138 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 115, 19 |
Conread position: | 425-616 |
Cow position: | chr1:22590081-22590272 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 142 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 118, 97 |
Conread position: | 429-589 |
Cow position: | chr1:55120381-55120229 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 125 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 434-594 |
Cow position: | chr1:15983067-15982912 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 482-599 |
Cow position: | chr1:47365616-47365731 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 96 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.