Cow genome map
| Conread name: | Ss1.1-Pig2-5O09.5 |
| Conread position: | 356-594 |
| Cow position: | chr12:9381914-9382144 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 357-594 |
| Cow position: | chr12:9956131-9955896 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 79, 43 |
| Conread position: | 358-474 |
| Cow position: | chr12:43226516-43226400 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 358-479 |
| Cow position: | chr12:8540557-8540436 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 358-539 |
| Cow position: | chr12:15178848-15178677 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 358-589 |
| Cow position: | chr12:2911295-2911063 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 358-592 |
| Cow position: | chr12:34408715-34408946 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 358-594 |
| Cow position: | chr12:8978573-8978804 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 359-613 |
| Cow position: | chr12:4541511-4541267 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 360-509 |
| Cow position: | chr12:43016172-43016021 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 360-593 |
| Cow position: | chr12:31622089-31621862 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 177, 49 |
| Conread position: | 360-594 |
| Cow position: | chr12:3016353-3016125 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 360-594 |
| Cow position: | chr12:39571807-39572037 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 365-593 |
| Cow position: | chr12:43972382-43972603 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 401-594 |
| Cow position: | chr12:8259821-8259629 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 137, 92 |
| Conread position: | 414-594 |
| Cow position: | chr12:34772624-34772437 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 423-585 |
| Cow position: | chr12:21241849-21242007 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 458-708 |
| Cow position: | chr12:12216709-12216957 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 115, 53 |
| Conread position: | 464-589 |
| Cow position: | chr12:15364527-15364651 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 470-589 |
| Cow position: | chr12:8540211-8540093 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 519-693 |
| Cow position: | chr12:8541143-8540966 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 149 |
Show alignments to all cow chromosomes.