Cow genome map

Conread name: Ss1.1-Pig2-5O09.5

Conread position: 329-695
Cow position: chr14:35408433-35408068 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 86

Conread position: 353-580
Cow position: chr14:3541516-3541299 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 177, 51

Conread position: 356-594
Cow position: chr14:44739724-44739954 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 357-586
Cow position: chr14:33158543-33158308 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 165

Conread position: 358-512
Cow position: chr14:3690125-3690275 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 358-594
Cow position: chr14:31969551-31969785 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 199, 156

Conread position: 358-594
Cow position: chr14:34208063-34207829 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 360-471
Cow position: chr14:25934483-25934371 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 80

Conread position: 360-513
Cow position: chr14:40069135-40068985 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 22, 14

Conread position: 360-574
Cow position: chr14:12337351-12337141 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 360-588
Cow position: chr14:27621913-27622131 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 175, 16

Conread position: 360-594
Cow position: chr14:5363285-5363519 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 360-594
Cow position: chr14:8807697-8807928 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 151

Conread position: 364-589
Cow position: chr14:9228663-9228438 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 364-594
Cow position: chr14:20891039-20890813 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 365-473
Cow position: chr14:3701566-3701674 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 366-512
Cow position: chr14:10487651-10487794 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 134, 22

Conread position: 366-582
Cow position: chr14:43081698-43081493 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 38

Conread position: 366-594
Cow position: chr14:24207423-24207668 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 368-560
Cow position: chr14:46525008-46524824 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 368-588
Cow position: chr14:46396751-46396967 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 368-606
Cow position: chr14:33156268-33156029 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 173, 36

Conread position: 388-512
Cow position: chr14:8197489-8197608 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 394-594
Cow position: chr14:48427442-48427628 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 400-594
Cow position: chr14:27622128-27622320 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 47

Conread position: 401-599
Cow position: chr14:23876956-23877143 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 164, 29

Conread position: 408-594
Cow position: chr14:16735623-16735443 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 162, 106

Conread position: 413-588
Cow position: chr14:10618750-10618575 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 27

Conread position: 413-589
Cow position: chr14:26622085-26621911 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 144
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 124, 13

Conread position: 413-593
Cow position: chr14:37033574-37033393 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 30, 24

Conread position: 451-587
Cow position: chr14:15963549-15963415 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 102

Conread position: 462-591
Cow position: chr14:25934261-25934131 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 464-590
Cow position: chr14:47680784-47680909 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 0

Show alignments to all cow chromosomes.