Cow genome map
| Conread name: | Ss1.1-Pig2-5O09.5 |
| Conread position: | 329-695 |
| Cow position: | chr14:35408433-35408068 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 86 |
| Conread position: | 353-580 |
| Cow position: | chr14:3541516-3541299 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 177, 51 |
| Conread position: | 356-594 |
| Cow position: | chr14:44739724-44739954 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 357-586 |
| Cow position: | chr14:33158543-33158308 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 165 |
| Conread position: | 358-512 |
| Cow position: | chr14:3690125-3690275 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 358-594 |
| Cow position: | chr14:31969551-31969785 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 199, 156 |
| Conread position: | 358-594 |
| Cow position: | chr14:34208063-34207829 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 360-471 |
| Cow position: | chr14:25934483-25934371 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 360-513 |
| Cow position: | chr14:40069135-40068985 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 360-574 |
| Cow position: | chr14:12337351-12337141 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 360-588 |
| Cow position: | chr14:27621913-27622131 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 175, 16 |
| Conread position: | 360-594 |
| Cow position: | chr14:5363285-5363519 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 360-594 |
| Cow position: | chr14:8807697-8807928 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 151 |
| Conread position: | 364-589 |
| Cow position: | chr14:9228663-9228438 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 364-594 |
| Cow position: | chr14:20891039-20890813 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 365-473 |
| Cow position: | chr14:3701566-3701674 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-512 |
| Cow position: | chr14:10487651-10487794 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 134, 22 |
| Conread position: | 366-582 |
| Cow position: | chr14:43081698-43081493 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 366-594 |
| Cow position: | chr14:24207423-24207668 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 368-560 |
| Cow position: | chr14:46525008-46524824 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 368-588 |
| Cow position: | chr14:46396751-46396967 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 368-606 |
| Cow position: | chr14:33156268-33156029 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 173, 36 |
| Conread position: | 388-512 |
| Cow position: | chr14:8197489-8197608 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 394-594 |
| Cow position: | chr14:48427442-48427628 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 400-594 |
| Cow position: | chr14:27622128-27622320 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 401-599 |
| Cow position: | chr14:23876956-23877143 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 164, 29 |
| Conread position: | 408-594 |
| Cow position: | chr14:16735623-16735443 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 162, 106 |
| Conread position: | 413-588 |
| Cow position: | chr14:10618750-10618575 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 122, 27 |
| Conread position: | 413-589 |
| Cow position: | chr14:26622085-26621911 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 124, 13 |
| Conread position: | 413-593 |
| Cow position: | chr14:37033574-37033393 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 451-587 |
| Cow position: | chr14:15963549-15963415 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 102 |
| Conread position: | 462-591 |
| Cow position: | chr14:25934261-25934131 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 464-590 |
| Cow position: | chr14:47680784-47680909 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.