Cow genome map

Conread name: Ss1.1-Pig2-5O09.5

Conread position: 352-589
Cow position: chr16:23495687-23495931 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 93

Conread position: 354-588
Cow position: chr16:19262180-19262411 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 19, 62

Conread position: 357-589
Cow position: chr16:34131419-34131645 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 33

Conread position: 357-594
Cow position: chr16:33147782-33147552 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 358-544
Cow position: chr16:27974621-27974808 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 18

Conread position: 358-590
Cow position: chr16:8786713-8786944 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 358-594
Cow position: chr16:1632669-1632437 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 358-594
Cow position: chr16:20984997-20984757 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 156, 0

Conread position: 358-594
Cow position: chr16:26065659-26065422 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 358-594
Cow position: chr16:35411982-35412213 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 15, 58

Conread position: 358-594
Cow position: chr16:50545635-50545867 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 42, 54

Conread position: 359-594
Cow position: chr16:3892079-3891858 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 62, 29

Conread position: 360-520
Cow position: chr16:33709754-33709597 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 360-545
Cow position: chr16:32029453-32029273 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 175, 44

Conread position: 360-582
Cow position: chr16:37842300-37842090 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 175, 44

Conread position: 360-588
Cow position: chr16:43162655-43162871 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 175, 44

Conread position: 360-591
Cow position: chr16:7770387-7770163 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 16

Conread position: 360-592
Cow position: chr16:22240350-22240128 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 175, 44

Conread position: 361-498
Cow position: chr16:3854318-3854454 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 363-595
Cow position: chr16:56224035-56223808 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 13

Conread position: 364-510
Cow position: chr16:23384549-23384401 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 32

Conread position: 370-589
Cow position: chr16:200444-200230 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 6

Conread position: 370-589
Cow position: chr16:49726377-49726156 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 73

Conread position: 379-594
Cow position: chr16:10444357-10444131 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 28, 192

Conread position: 391-586
Cow position: chr16:43196442-43196253 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 400-594
Cow position: chr16:46377257-46377440 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 403-593
Cow position: chr16:10250725-10250538 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 139, 0

Conread position: 407-594
Cow position: chr16:54409359-54409177 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 45, 38

Conread position: 408-580
Cow position: chr16:46545348-46545516 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 107

Conread position: 415-676
Cow position: chr16:22245544-22245285 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 120, 23

Conread position: 424-594
Cow position: chr16:44522975-44522810 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 426-594
Cow position: chr16:30563362-30563198 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 426-594
Cow position: chr16:31703599-31703435 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 441-594
Cow position: chr16:36429990-36429842 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 126
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 444-612
Cow position: chr16:13126794-13126962 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 162

Conread position: 453-708
Cow position: chr16:30712668-30712923 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 105, 16

Conread position: 465-706
Cow position: chr16:9575132-9575374 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 46

Conread position: 466-602
Cow position: chr16:28755407-28755271 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 71, 97

Conread position: 473-707
Cow position: chr16:51098709-51098943 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 100, 38

Conread position: 475-593
Cow position: chr16:19937360-19937244 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Show alignments to all cow chromosomes.