Cow genome map
| Conread name: | Ss1.1-Pig2-5O09.5 |
| Conread position: | 358-581 |
| Cow position: | chr17:21591775-21591554 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 358-589 |
| Cow position: | chr17:1325239-1325458 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 358-589 |
| Cow position: | chr17:1730237-1730467 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 358-589 |
| Cow position: | chr17:11072271-11072498 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 358-592 |
| Cow position: | chr17:21585636-21585404 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 41, 138 |
| Conread position: | 358-594 |
| Cow position: | chr17:1491263-1491498 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 30 |
| Conread position: | 358-594 |
| Cow position: | chr17:4879196-4879430 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 358-594 |
| Cow position: | chr17:24861648-24861880 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 358-609 |
| Cow position: | chr17:15483757-15483512 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 359-592 |
| Cow position: | chr17:27761190-27761412 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 178, 13 |
| Conread position: | 360-498 |
| Cow position: | chr17:25148103-25147965 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 360-539 |
| Cow position: | chr17:20347298-20347126 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 360-541 |
| Cow position: | chr17:22822983-22822806 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 6, 49 |
| Conread position: | 360-582 |
| Cow position: | chr17:41950365-41950573 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 175, 44 |
| Conread position: | 360-589 |
| Cow position: | chr17:16359943-16360168 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 214, 89 |
| Conread position: | 360-589 |
| Cow position: | chr17:27302347-27302119 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 169 |
| Conread position: | 360-589 |
| Cow position: | chr17:31562351-31562121 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 55, 81 |
| Conread position: | 360-593 |
| Cow position: | chr17:25546239-25546006 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 362-528 |
| Cow position: | chr17:24997363-24997197 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 362-594 |
| Cow position: | chr17:1756936-1756704 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 362-594 |
| Cow position: | chr17:38189914-38189690 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 363-580 |
| Cow position: | chr17:891695-891479 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 97 |
| Conread position: | 364-593 |
| Cow position: | chr17:11052005-11052237 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 53, 199 |
| Conread position: | 369-601 |
| Cow position: | chr17:21461130-21461360 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 33 |
| Conread position: | 370-585 |
| Cow position: | chr17:10636398-10636179 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 377-622 |
| Cow position: | chr17:16380554-16380308 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 40, 64 |
| Conread position: | 382-594 |
| Cow position: | chr17:17641847-17641636 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 64, 97 |
| Conread position: | 399-704 |
| Cow position: | chr17:20194009-20193718 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 174, 70 |
| Conread position: | 400-543 |
| Cow position: | chr17:5347951-5347808 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 400-589 |
| Cow position: | chr17:24584050-24583861 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 405-593 |
| Cow position: | chr17:11124388-11124201 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 154 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 408-512 |
| Cow position: | chr17:24988793-24988689 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 413-589 |
| Cow position: | chr17:11244533-11244708 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 103, 24 |
| Conread position: | 419-589 |
| Cow position: | chr17:6763136-6763309 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 146, 63 |
| Conread position: | 427-582 |
| Cow position: | chr17:34054058-34054211 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 428-589 |
| Cow position: | chr17:22836161-22835998 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 436-593 |
| Cow position: | chr17:2134755-2134601 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 92, 99 |
| Conread position: | 531-691 |
| Cow position: | chr17:30148907-30148749 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 30 |
Show alignments to all cow chromosomes.