Cow genome map
| Conread name: | Ss1.1-Pig2-5O09.5 |
| Conread position: | 357-703 |
| Cow position: | chr18:50288822-50288495 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 201, 32 |
| Conread position: | 358-528 |
| Cow position: | chr18:465167-464997 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 358-545 |
| Cow position: | chr18:15806276-15806461 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 60, 72 |
| Conread position: | 358-580 |
| Cow position: | chr18:43133835-43133616 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 358-594 |
| Cow position: | chr18:42986157-42985927 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 142, 155 |
| Conread position: | 358-706 |
| Cow position: | chr18:16351286-16351632 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 62 |
| Conread position: | 360-587 |
| Cow position: | chr18:5226885-5227099 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 360-593 |
| Cow position: | chr18:38904755-38904531 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 175, 44 |
| Conread position: | 360-594 |
| Cow position: | chr18:23470374-23470605 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 98 |
| Conread position: | 360-606 |
| Cow position: | chr18:4940450-4940209 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 5, 37 |
| Conread position: | 364-589 |
| Cow position: | chr18:29105700-29105478 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 218, 111 |
| Conread position: | 364-708 |
| Cow position: | chr18:37219885-37220222 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 208, 150 |
| Conread position: | 369-545 |
| Cow position: | chr18:7115241-7115072 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 390-589 |
| Cow position: | chr18:14727760-14727560 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 400-593 |
| Cow position: | chr18:21549309-21549501 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 83, 20 |
| Conread position: | 405-593 |
| Cow position: | chr18:54945828-54945641 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 131, 35 |
| Conread position: | 422-588 |
| Cow position: | chr18:18990651-18990485 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 89, 15 |
| Conread position: | 429-593 |
| Cow position: | chr18:50301201-50301037 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 448-586 |
| Cow position: | chr18:12027760-12027621 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 125, 110 |
Show alignments to all cow chromosomes.