Cow genome map
| Conread name: | Ss1.1-Pig2-5O09.5 |
| Conread position: | 354-589 |
| Cow position: | chr23:37098732-37098967 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 26 |
| Conread position: | 354-592 |
| Cow position: | chr23:18271863-18272109 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 5 |
| Conread position: | 357-589 |
| Cow position: | chr23:5424703-5424932 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 46 |
| Conread position: | 357-591 |
| Cow position: | chr23:21730271-21730039 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 74 |
| Conread position: | 358-518 |
| Cow position: | chr23:3552533-3552373 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 134 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 358-572 |
| Cow position: | chr23:37136160-37135939 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 43, 153 |
| Conread position: | 358-593 |
| Cow position: | chr23:13562483-13562248 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 358-594 |
| Cow position: | chr23:9728537-9728304 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 359-509 |
| Cow position: | chr23:3531677-3531825 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 359-594 |
| Cow position: | chr23:35974291-35974074 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 178, 45 |
| Conread position: | 360-587 |
| Cow position: | chr23:9463773-9463988 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 175, 16 |
| Conread position: | 360-587 |
| Cow position: | chr23:14159377-14159604 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 73 |
| Conread position: | 360-593 |
| Cow position: | chr23:1165055-1164823 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 360-593 |
| Cow position: | chr23:4506601-4506835 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 360-593 |
| Cow position: | chr23:39078309-39078090 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 175, 43 |
| Conread position: | 360-593 |
| Cow position: | chr23:39092584-39092804 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 175, 44 |
| Conread position: | 360-594 |
| Cow position: | chr23:4785709-4785955 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 10, 95 |
| Conread position: | 362-591 |
| Cow position: | chr23:37977323-37977093 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 118 |
| Conread position: | 364-594 |
| Cow position: | chr23:39032478-39032247 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 364-599 |
| Cow position: | chr23:2536485-2536711 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 376-594 |
| Cow position: | chr23:3521770-3521979 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 406-593 |
| Cow position: | chr23:39491404-39491216 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 11, 154 |
| Conread position: | 409-594 |
| Cow position: | chr23:20785713-20785896 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 164, 105 |
| Conread position: | 411-594 |
| Cow position: | chr23:21746933-21747109 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 412-588 |
| Cow position: | chr23:10720226-10720054 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 161, 56 |
| Conread position: | 413-593 |
| Cow position: | chr23:14176835-14177013 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 420-589 |
| Cow position: | chr23:38426643-38426803 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 463-693 |
| Cow position: | chr23:15609922-15609692 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 110, 51 |
| Conread position: | 465-594 |
| Cow position: | chr23:38221786-38221912 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 570-709 |
| Cow position: | chr23:6591595-6591733 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 572-712 |
| Cow position: | chr23:35933550-35933407 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 96 |
Show alignments to all cow chromosomes.