Cow genome map
| Conread name: | Ss1.1-Pig2-5O09.5 |
| Conread position: | 353-628 |
| Cow position: | chr25:22585492-22585232 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 44, 5 |
| Conread position: | 357-486 |
| Cow position: | chr25:6067082-6066954 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 357-593 |
| Cow position: | chr25:16805806-16805578 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 172, 43 |
| Conread position: | 358-496 |
| Cow position: | chr25:5779389-5779522 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 358-587 |
| Cow position: | chr25:7222043-7221816 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 41, 139 |
| Conread position: | 358-593 |
| Cow position: | chr25:36035207-36035443 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 186 |
| Conread position: | 358-594 |
| Cow position: | chr25:6130942-6131181 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 358-600 |
| Cow position: | chr25:26243733-26243497 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 360-546 |
| Cow position: | chr25:22809321-22809504 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 175, 62 |
| Conread position: | 360-546 |
| Cow position: | chr25:22816568-22816751 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 175, 62 |
| Conread position: | 360-602 |
| Cow position: | chr25:18009992-18009761 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 91, 43 |
| Conread position: | 361-588 |
| Cow position: | chr25:9152-8921 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 176 |
| Conread position: | 362-508 |
| Cow position: | chr25:21956319-21956174 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 362-569 |
| Cow position: | chr25:8544012-8544218 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 134 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 365-589 |
| Cow position: | chr25:6260858-6260637 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 209, 149 |
| Conread position: | 365-602 |
| Cow position: | chr25:5783517-5783736 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 170, 38 |
| Conread position: | 368-594 |
| Cow position: | chr25:22569515-22569739 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 371-594 |
| Cow position: | chr25:22597535-22597325 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 377-601 |
| Cow position: | chr25:11256309-11256089 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 49 |
| Conread position: | 380-594 |
| Cow position: | chr25:16155138-16155345 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 17, 134 |
| Conread position: | 392-594 |
| Cow position: | chr25:36075896-36075695 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 149, 99 |
| Conread position: | 400-589 |
| Cow position: | chr25:27495693-27495883 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 173, 158 |
| Conread position: | 404-589 |
| Cow position: | chr25:24605054-24604871 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 133, 15 |
| Conread position: | 413-593 |
| Cow position: | chr25:31246983-31246805 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 124, 27 |
| Conread position: | 414-555 |
| Cow position: | chr25:14530856-14530717 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 415-591 |
| Cow position: | chr25:10292204-10292379 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 120, 24 |
| Conread position: | 415-599 |
| Cow position: | chr25:24580525-24580708 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 150 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 40, 109 |
| Conread position: | 416-588 |
| Cow position: | chr25:25645104-25645272 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 434-594 |
| Cow position: | chr25:15456161-15456001 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 447-589 |
| Cow position: | chr25:16164338-16164476 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 88, 103 |
| Conread position: | 447-594 |
| Cow position: | chr25:11321358-11321213 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 449-594 |
| Cow position: | chr25:15656834-15656985 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 458-593 |
| Cow position: | chr25:21653613-21653478 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 78, 105 |
Show alignments to all cow chromosomes.