Cow genome map
| Conread name: | Ss1.1-Pig2-5O09.5 |
| Conread position: | 354-602 |
| Cow position: | chr29:44022144-44021893 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 87 |
| Conread position: | 355-594 |
| Cow position: | chr29:4245410-4245173 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 45, 144 |
| Conread position: | 358-449 |
| Cow position: | chr29:3336770-3336860 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 358-511 |
| Cow position: | chr29:16336221-16336069 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 61 |
| Conread position: | 358-599 |
| Cow position: | chr29:45620078-45619843 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 207, 111 |
| Conread position: | 359-598 |
| Cow position: | chr29:13562155-13561917 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 38, 136 |
| Conread position: | 360-473 |
| Cow position: | chr29:44696636-44696748 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 360-509 |
| Cow position: | chr29:1542116-1541962 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 83 |
| Conread position: | 360-546 |
| Cow position: | chr29:32939583-32939770 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 121, 10 |
| Conread position: | 360-567 |
| Cow position: | chr29:29783649-29783859 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 360-588 |
| Cow position: | chr29:3841135-3840915 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 176, 44 |
| Conread position: | 360-588 |
| Cow position: | chr29:13386899-13386676 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 177, 58 |
| Conread position: | 360-593 |
| Cow position: | chr29:20672870-20673093 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 183 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 177, 44 |
| Conread position: | 361-589 |
| Cow position: | chr29:1627564-1627776 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 362-592 |
| Cow position: | chr29:37996520-37996751 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 362-593 |
| Cow position: | chr29:4669067-4668834 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 364-582 |
| Cow position: | chr29:36055078-36055288 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 171, 40 |
| Conread position: | 367-512 |
| Cow position: | chr29:27058669-27058524 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-589 |
| Cow position: | chr29:11191250-11191035 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 368-594 |
| Cow position: | chr29:26737804-26738028 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 93, 64 |
| Conread position: | 369-594 |
| Cow position: | chr29:27060305-27060529 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 381-589 |
| Cow position: | chr29:24311787-24311993 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 37, 135 |
| Conread position: | 388-593 |
| Cow position: | chr29:37065068-37064873 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 147, 16 |
| Conread position: | 409-594 |
| Cow position: | chr29:33557486-33557653 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 413-588 |
| Cow position: | chr29:32149156-32149327 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 122, 26 |
| Conread position: | 419-594 |
| Cow position: | chr29:38865546-38865716 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 433-594 |
| Cow position: | chr29:26945971-26945813 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 439-586 |
| Cow position: | chr29:36478258-36478405 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 96, 120 |
| Conread position: | 450-594 |
| Cow position: | chr29:26644809-26644953 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 462-594 |
| Cow position: | chr29:2121161-2121292 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 533-708 |
| Cow position: | chr29:28016773-28016597 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
Show alignments to all cow chromosomes.