Cow genome map
| Conread name: | Ss1.1-Pig2-5O09.5 |
| Conread position: | 357-589 |
| Cow position: | chr7:58445376-58445599 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 178, 47 |
| Conread position: | 357-592 |
| Cow position: | chr7:43051661-43051890 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 19 |
| Conread position: | 357-603 |
| Cow position: | chr7:23795246-23795000 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 73, 30 |
| Conread position: | 358-512 |
| Cow position: | chr7:44938432-44938270 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 358-581 |
| Cow position: | chr7:43870770-43870549 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 358-594 |
| Cow position: | chr7:3168768-3169003 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 204, 135 |
| Conread position: | 358-594 |
| Cow position: | chr7:3662971-3662745 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 358-594 |
| Cow position: | chr7:18108657-18108426 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 358-594 |
| Cow position: | chr7:49094082-49094310 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 215, 31 |
| Conread position: | 358-599 |
| Cow position: | chr7:31117876-31118113 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 358-610 |
| Cow position: | chr7:43568967-43569219 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 210, 173 |
| Conread position: | 359-592 |
| Cow position: | chr7:43899628-43899398 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 41 |
| Conread position: | 360-588 |
| Cow position: | chr7:32919265-32919493 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 156, 44 |
| Conread position: | 360-589 |
| Cow position: | chr7:23927874-23927633 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 360-591 |
| Cow position: | chr7:33468508-33468288 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 105, 44 |
| Conread position: | 360-593 |
| Cow position: | chr7:8606976-8606759 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 177, 43 |
| Conread position: | 360-593 |
| Cow position: | chr7:25967143-25967366 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 175, 44 |
| Conread position: | 360-593 |
| Cow position: | chr7:28335929-28336150 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 362-593 |
| Cow position: | chr7:21994486-21994263 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 102, 42 |
| Conread position: | 365-708 |
| Cow position: | chr7:25127095-25126759 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 149 |
| Conread position: | 374-594 |
| Cow position: | chr7:5343241-5343447 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 8, 46 |
| Conread position: | 382-593 |
| Cow position: | chr7:45939897-45940107 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 155, 22 |
| Conread position: | 394-563 |
| Cow position: | chr7:61510513-61510686 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 400-594 |
| Cow position: | chr7:2127997-2128193 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 403-632 |
| Cow position: | chr7:21994038-21994254 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 189, 107 |
| Conread position: | 408-601 |
| Cow position: | chr7:32874344-32874534 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 75, 24 |
| Conread position: | 410-594 |
| Cow position: | chr7:4699447-4699267 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 413-589 |
| Cow position: | chr7:14403021-14402846 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 122, 24 |
| Conread position: | 413-600 |
| Cow position: | chr7:52896785-52896597 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 124, 26 |
| Conread position: | 432-588 |
| Cow position: | chr7:47884161-47884010 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 464-708 |
| Cow position: | chr7:11647983-11648220 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 98, 57 |
| Conread position: | 466-708 |
| Cow position: | chr7:11614485-11614251 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 533-706 |
| Cow position: | chr7:67304468-67304641 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 68, 132 |
| Conread position: | 560-706 |
| Cow position: | chr7:45598515-45598663 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 113 |
Show alignments to all cow chromosomes.