Cow genome map
| Conread name: | Ss1.1-Pig2-5O09.5 |
| Conread position: | 352-570 |
| Cow position: | chr8:7676660-7676873 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 102, 96 |
| Conread position: | 357-486 |
| Cow position: | chr8:4934890-4934761 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 357-594 |
| Cow position: | chr8:35511752-35511532 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 357-594 |
| Cow position: | chr8:54009604-54009828 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 358-510 |
| Cow position: | chr8:30550272-30550424 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 358-594 |
| Cow position: | chr8:6569095-6569325 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 358-594 |
| Cow position: | chr8:27827593-27827361 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 358-594 |
| Cow position: | chr8:49793208-49793446 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 84, 201 |
| Conread position: | 358-594 |
| Cow position: | chr8:50704833-50704586 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 74, 171 |
| Conread position: | 358-706 |
| Cow position: | chr8:11921840-11922182 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 359-589 |
| Cow position: | chr8:13847377-13847148 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 359-707 |
| Cow position: | chr8:55930053-55930398 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 360-584 |
| Cow position: | chr8:21056456-21056667 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 175, 44 |
| Conread position: | 360-589 |
| Cow position: | chr8:4127514-4127744 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 79 |
| Conread position: | 360-594 |
| Cow position: | chr8:1626270-1626504 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 28 |
| Conread position: | 360-602 |
| Cow position: | chr8:48978700-48978466 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 362-473 |
| Cow position: | chr8:51241555-51241444 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 365-497 |
| Cow position: | chr8:4052529-4052656 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 368-594 |
| Cow position: | chr8:26082675-26082454 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 368-594 |
| Cow position: | chr8:40324690-40324461 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 42, 140 |
| Conread position: | 370-588 |
| Cow position: | chr8:26829748-26829534 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 371-510 |
| Cow position: | chr8:38367653-38367514 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 371-578 |
| Cow position: | chr8:52022801-52022602 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 380-594 |
| Cow position: | chr8:5519004-5519213 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 389-589 |
| Cow position: | chr8:9294678-9294477 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 185, 169 |
| Conread position: | 392-593 |
| Cow position: | chr8:12840675-12840481 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 397-594 |
| Cow position: | chr8:13324161-13324349 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 181, 118 |
| Conread position: | 398-589 |
| Cow position: | chr8:5440289-5440467 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 175, 17 |
| Conread position: | 400-594 |
| Cow position: | chr8:33516531-33516337 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 159, 46 |
| Conread position: | 401-510 |
| Cow position: | chr8:45858177-45858287 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 405-706 |
| Cow position: | chr8:23094496-23094793 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 414-594 |
| Cow position: | chr8:54315889-54315713 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 58, 41 |
| Conread position: | 420-590 |
| Cow position: | chr8:30563635-30563813 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 115, 17 |
| Conread position: | 420-594 |
| Cow position: | chr8:5655021-5655198 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 122, 92 |
| Conread position: | 424-708 |
| Cow position: | chr8:25582226-25581949 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 60 |
| Conread position: | 435-708 |
| Cow position: | chr8:830997-831258 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 138, 18 |
| Conread position: | 447-599 |
| Cow position: | chr8:33173188-33173335 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 463-587 |
| Cow position: | chr8:24628707-24628583 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 72, 97 |
| Conread position: | 481-708 |
| Cow position: | chr8:44484302-44484525 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 5, 14 |
| Conread position: | 519-708 |
| Cow position: | chr8:24631739-24631929 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 147 |
Show alignments to all cow chromosomes.