Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8004C14.3
        

               Conread position:
               9-156
               

               Cow position:
               chr10:55172253-55172107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               145-296
               

               Cow position:
               chr10:55168909-55168758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               294-405
               

               Cow position:
               chr10:55168315-55168204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               404-546
               

               Cow position:
               chr10:55167710-55167568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               542-733
               

               Cow position:
               chr10:55166821-55166630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               135, 129
               

               Conread position:
               728-865
               

               Cow position:
               chr10:55166366-55166229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               863-1044
               

               Cow position:
               chr10:55165238-55165057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               150
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               29, 37
               

               Conread position:
               1040-1191
               

               Cow position:
               chr10:55164309-55164158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               132
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1257-1416
               

               Cow position:
               chr10:55161408-55161249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1419-1571
               

               Cow position:
               chr10:55159778-55159626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.