Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006P11.3 |
| Conread position: | 77-381 |
| Cow position: | chr14:46986391-46986701 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 12, 66 |
| Conread position: | 86-335 |
| Cow position: | chr14:19589133-19589395 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 42, 128 |
| Conread position: | 88-362 |
| Cow position: | chr14:21593360-21593643 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 57, 89 |
| Conread position: | 88-362 |
| Cow position: | chr14:46298265-46298541 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 58, 159 |
| Conread position: | 88-365 |
| Cow position: | chr14:48398624-48398331 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 132 |
| Conread position: | 88-378 |
| Cow position: | chr14:4780209-4779913 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 131 |
| Conread position: | 88-396 |
| Cow position: | chr14:12076519-12076840 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 34, 114 |
| Conread position: | 89-334 |
| Cow position: | chr14:8593551-8593809 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 215 |
| Conread position: | 89-361 |
| Cow position: | chr14:35168458-35168739 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 89-378 |
| Cow position: | chr14:21185382-21185102 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 117 |
| Conread position: | 89-391 |
| Cow position: | chr14:41469515-41469822 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 58, 147 |
| Conread position: | 90-370 |
| Cow position: | chr14:19949048-19949340 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 56, 217 |
| Conread position: | 90-377 |
| Cow position: | chr14:1600295-1600011 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 57, 92 |
| Conread position: | 92-379 |
| Cow position: | chr14:24450198-24449898 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 55, 85 |
| Conread position: | 93-378 |
| Cow position: | chr14:6226123-6226411 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 147 |
| Conread position: | 98-342 |
| Cow position: | chr14:33733859-33734098 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 98-386 |
| Cow position: | chr14:1672334-1672050 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 101, 73 |
| Conread position: | 128-372 |
| Cow position: | chr14:35325675-35325934 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 145-372 |
| Cow position: | chr14:5878172-5877954 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 148-349 |
| Cow position: | chr14:48822117-48821918 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 61, 93 |
| Conread position: | 148-351 |
| Cow position: | chr14:14191771-14191563 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 145 |
| Conread position: | 148-372 |
| Cow position: | chr14:8701408-8701199 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 148-372 |
| Cow position: | chr14:14095067-14094835 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 48 |
| Conread position: | 148-378 |
| Cow position: | chr14:22448297-22448532 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 148-381 |
| Cow position: | chr14:36547570-36547804 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 88, 70 |
| Conread position: | 152-348 |
| Cow position: | chr14:19195718-19195922 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 167-352 |
| Cow position: | chr14:27771463-27771287 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 204-338 |
| Cow position: | chr14:36579535-36579403 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 205-378 |
| Cow position: | chr14:41775061-41775231 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 215-347 |
| Cow position: | chr14:21587996-21588124 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 215-367 |
| Cow position: | chr14:16551434-16551285 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 215-383 |
| Cow position: | chr14:22825975-22825809 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 224-380 |
| Cow position: | chr14:43265119-43264964 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 250-378 |
| Cow position: | chr14:41949864-41949736 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 40 |
| Conread position: | 254-368 |
| Cow position: | chr14:13483544-13483655 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 260-376 |
| Cow position: | chr14:42616765-42616650 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 77 |
Show alignments to all cow chromosomes.