Cow genome map

Conread name: Ss1.1-Pig3-SRG8006P11.3

Conread position: 49-376
Cow position: chr16:7557642-7557988 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 152

Conread position: 60-386
Cow position: chr16:38378332-38377982 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 235
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 147

Conread position: 62-326
Cow position: chr16:42915663-42915388 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 46

Conread position: 63-377
Cow position: chr16:29519853-29519527 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 61

Conread position: 76-345
Cow position: chr16:36134457-36134177 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 153

Conread position: 79-379
Cow position: chr16:16024293-16024597 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 109

Conread position: 84-354
Cow position: chr16:45726064-45725796 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 65

Conread position: 84-367
Cow position: chr16:20671644-20671362 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 114

Conread position: 84-373
Cow position: chr16:51165197-51164914 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 63, 22

Conread position: 86-376
Cow position: chr16:28360960-28360662 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 58, 115

Conread position: 87-354
Cow position: chr16:29385048-29384776 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 33

Conread position: 87-365
Cow position: chr16:16640305-16640594 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 101

Conread position: 87-366
Cow position: chr16:26875241-26875531 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 87-378
Cow position: chr16:8855532-8855227 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 237

Conread position: 87-380
Cow position: chr16:29615813-29616113 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 60, 188

Conread position: 87-383
Cow position: chr16:30960281-30959975 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 33, 116

Conread position: 88-362
Cow position: chr16:51671959-51672239 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 181
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 114

Conread position: 88-377
Cow position: chr16:21344881-21344595 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 59, 38

Conread position: 88-378
Cow position: chr16:19051426-19051129 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 194
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 42

Conread position: 88-395
Cow position: chr16:2581336-2581655 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 113

Conread position: 89-347
Cow position: chr16:8684193-8683930 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 56, 22

Conread position: 89-376
Cow position: chr16:28078215-28077916 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 35, 115

Conread position: 89-378
Cow position: chr16:21403361-21403663 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 58, 93

Conread position: 89-378
Cow position: chr16:53680492-53680199 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 86

Conread position: 89-390
Cow position: chr16:43347320-43347007 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 210
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 113

Conread position: 90-379
Cow position: chr16:30983259-30983548 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 124

Conread position: 91-381
Cow position: chr16:1545118-1544820 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 75

Conread position: 92-356
Cow position: chr16:52712389-52712110 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 55, 29

Conread position: 93-380
Cow position: chr16:52802952-52802659 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 170

Conread position: 98-378
Cow position: chr16:29314521-29314809 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 49, 15

Conread position: 103-400
Cow position: chr16:27840019-27839724 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 44, 152

Conread position: 118-378
Cow position: chr16:12825212-12824941 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 8

Conread position: 148-377
Cow position: chr16:21343623-21343851 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 27

Conread position: 157-373
Cow position: chr16:34165675-34165894 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 64, 94

Conread position: 168-353
Cow position: chr16:29535839-29536029 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 101

Conread position: 193-367
Cow position: chr16:7140295-7140123 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 78, 22

Conread position: 209-361
Cow position: chr16:20391873-20391719 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 47

Conread position: 215-377
Cow position: chr16:33176983-33177144 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 215-382
Cow position: chr16:54506674-54506508 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 57

Conread position: 217-358
Cow position: chr16:42213965-42214104 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 219-372
Cow position: chr16:14285159-14285310 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 67

Conread position: 234-368
Cow position: chr16:15216502-15216368 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 235-392
Cow position: chr16:14141038-14141194 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 143, 57

Conread position: 250-369
Cow position: chr16:54670572-54670454 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 42, 0

Show alignments to all cow chromosomes.