Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006P11.3 |
| Conread position: | 48-352 |
| Cow position: | chr22:8860908-8860595 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 50-338 |
| Cow position: | chr22:7076392-7076681 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 217 |
| Conread position: | 50-374 |
| Cow position: | chr22:2479832-2480149 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 35, 151 |
| Conread position: | 50-378 |
| Cow position: | chr22:106856-106519 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 34 |
| Conread position: | 52-362 |
| Cow position: | chr22:4254505-4254205 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 26 |
| Conread position: | 73-386 |
| Cow position: | chr22:38354745-38355050 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 76-362 |
| Cow position: | chr22:29833632-29833341 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 76-378 |
| Cow position: | chr22:10584920-10584627 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 87-343 |
| Cow position: | chr22:7915831-7915574 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 79 |
| Conread position: | 87-369 |
| Cow position: | chr22:35711646-35711358 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 87-374 |
| Cow position: | chr22:19104370-19104668 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 63, 90 |
| Conread position: | 87-378 |
| Cow position: | chr22:7307623-7307326 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 60, 147 |
| Conread position: | 87-388 |
| Cow position: | chr22:28170989-28170679 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 60, 151 |
| Conread position: | 88-342 |
| Cow position: | chr22:18261624-18261867 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 88-354 |
| Cow position: | chr22:42611368-42611639 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 104 |
| Conread position: | 89-378 |
| Cow position: | chr22:40257289-40257586 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 90-362 |
| Cow position: | chr22:4158642-4158376 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 90-378 |
| Cow position: | chr22:42940826-42940545 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 31 |
| Conread position: | 91-378 |
| Cow position: | chr22:25459669-25459370 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 11, 230 |
| Conread position: | 92-362 |
| Cow position: | chr22:702822-702555 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 92-369 |
| Cow position: | chr22:24841148-24840877 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 96-359 |
| Cow position: | chr22:3766540-3766808 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 51, 107 |
| Conread position: | 97-378 |
| Cow position: | chr22:38741063-38741351 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 7 |
| Conread position: | 98-323 |
| Cow position: | chr22:3738490-3738254 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 98-368 |
| Cow position: | chr22:29609981-29609702 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 26 |
| Conread position: | 98-368 |
| Cow position: | chr22:44358227-44358504 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 68 |
| Conread position: | 111-354 |
| Cow position: | chr22:44634001-44634238 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 91 |
| Conread position: | 119-372 |
| Cow position: | chr22:33639309-33639048 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 27, 181 |
| Conread position: | 127-378 |
| Cow position: | chr22:25666557-25666808 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 147-385 |
| Cow position: | chr22:12000565-12000333 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 36 |
| Conread position: | 148-367 |
| Cow position: | chr22:33831707-33831486 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 164-361 |
| Cow position: | chr22:7299356-7299552 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 175-354 |
| Cow position: | chr22:4364334-4364149 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 46, 117 |
| Conread position: | 180-413 |
| Cow position: | chr22:16014214-16013982 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 186-353 |
| Cow position: | chr22:8964632-8964468 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 204-378 |
| Cow position: | chr22:27050115-27050287 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 217-378 |
| Cow position: | chr22:10019921-10019761 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 138, 102 |
| Conread position: | 219-367 |
| Cow position: | chr22:25627520-25627374 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 229-376 |
| Cow position: | chr22:43561273-43561416 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 139, 15 |
| Conread position: | 234-378 |
| Cow position: | chr22:16553822-16553962 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 242-358 |
| Cow position: | chr22:11460826-11460711 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 17 |
| Conread position: | 249-368 |
| Cow position: | chr22:1767513-1767630 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
Show alignments to all cow chromosomes.