Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006P11.3 |
| Conread position: | 62-365 |
| Cow position: | chr23:14168251-14167936 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 23, 41 |
| Conread position: | 76-358 |
| Cow position: | chr23:37179843-37180134 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 76-362 |
| Cow position: | chr23:37320900-37321187 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 83-381 |
| Cow position: | chr23:1982288-1981981 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 87-339 |
| Cow position: | chr23:14767061-14767322 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 186 |
| Conread position: | 87-368 |
| Cow position: | chr23:40643295-40642994 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 107 |
| Conread position: | 87-369 |
| Cow position: | chr23:37637663-37637968 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 87-378 |
| Cow position: | chr23:19411633-19411921 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 87-380 |
| Cow position: | chr23:4287308-4287607 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 114 |
| Conread position: | 87-423 |
| Cow position: | chr23:33221812-33222155 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 83 |
| Conread position: | 88-368 |
| Cow position: | chr23:12005008-12005291 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 59, 194 |
| Conread position: | 88-375 |
| Cow position: | chr23:34550934-34551221 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 59 |
| Conread position: | 88-377 |
| Cow position: | chr23:16384876-16384578 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 89-351 |
| Cow position: | chr23:15878743-15878472 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 87 |
| Conread position: | 89-354 |
| Cow position: | chr23:37627513-37627790 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 43 |
| Conread position: | 89-361 |
| Cow position: | chr23:24869267-24869541 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 57, 159 |
| Conread position: | 89-378 |
| Cow position: | chr23:27671362-27671073 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 90-378 |
| Cow position: | chr23:22405249-22405531 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 57, 160 |
| Conread position: | 92-379 |
| Cow position: | chr23:8242933-8242641 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 55, 125 |
| Conread position: | 95-362 |
| Cow position: | chr23:39211292-39211569 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 98-380 |
| Cow position: | chr23:16478996-16478711 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 135-390 |
| Cow position: | chr23:7606212-7606473 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 47, 57 |
| Conread position: | 148-378 |
| Cow position: | chr23:37450578-37450813 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 54, 44 |
| Conread position: | 148-380 |
| Cow position: | chr23:14588017-14588253 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 148-382 |
| Cow position: | chr23:10023359-10023588 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 148-386 |
| Cow position: | chr23:14854476-14854233 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 140 |
| Conread position: | 150-416 |
| Cow position: | chr23:36605753-36605479 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 69, 15 |
| Conread position: | 164-370 |
| Cow position: | chr23:16030367-16030574 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 165-382 |
| Cow position: | chr23:19058261-19058044 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 31 |
| Conread position: | 184-357 |
| Cow position: | chr23:27966304-27966475 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 207-327 |
| Cow position: | chr23:28188096-28188216 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 210-361 |
| Cow position: | chr23:3985771-3985622 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 5 |
| Conread position: | 210-378 |
| Cow position: | chr23:4770825-4770657 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 215-330 |
| Cow position: | chr23:33417132-33417245 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 216-388 |
| Cow position: | chr23:5405081-5405254 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 219-381 |
| Cow position: | chr23:20812126-20811966 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 29 |
| Conread position: | 249-378 |
| Cow position: | chr23:358814-358941 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 250-376 |
| Cow position: | chr23:28865864-28865988 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 255-397 |
| Cow position: | chr23:29312977-29313121 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.