Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006P11.3 |
| Conread position: | 75-358 |
| Cow position: | chr29:5758364-5758071 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 34 |
| Conread position: | 76-354 |
| Cow position: | chr29:29737172-29736882 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 32 |
| Conread position: | 76-363 |
| Cow position: | chr29:18590822-18590523 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 84-362 |
| Cow position: | chr29:35047871-35047600 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 65, 114 |
| Conread position: | 87-361 |
| Cow position: | chr29:27483931-27483668 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 158, 48 |
| Conread position: | 87-382 |
| Cow position: | chr29:20464925-20465232 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 60, 190 |
| Conread position: | 88-354 |
| Cow position: | chr29:22563236-22562966 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 69, 43 |
| Conread position: | 88-380 |
| Cow position: | chr29:36740054-36739760 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 59, 165 |
| Conread position: | 89-351 |
| Cow position: | chr29:480350-480626 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 89-362 |
| Cow position: | chr29:6172914-6173201 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 56, 218 |
| Conread position: | 89-368 |
| Cow position: | chr29:42322592-42322876 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 31 |
| Conread position: | 89-373 |
| Cow position: | chr29:17444029-17443726 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 90-378 |
| Cow position: | chr29:12402679-12402973 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 31 |
| Conread position: | 90-384 |
| Cow position: | chr29:39222408-39222102 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 97-377 |
| Cow position: | chr29:30115459-30115181 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 98-384 |
| Cow position: | chr29:18436049-18436339 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 47, 8 |
| Conread position: | 148-352 |
| Cow position: | chr29:40496729-40496530 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 148-358 |
| Cow position: | chr29:19679898-19679687 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 148-375 |
| Cow position: | chr29:17694737-17694972 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 151 |
| Conread position: | 149-388 |
| Cow position: | chr29:27614805-27614580 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 206, 43 |
| Conread position: | 157-362 |
| Cow position: | chr29:23144560-23144769 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 158-372 |
| Cow position: | chr29:8207133-8206911 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 44, 38 |
| Conread position: | 164-365 |
| Cow position: | chr29:25407535-25407328 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 5, 130 |
| Conread position: | 169-378 |
| Cow position: | chr29:659897-659690 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 212-380 |
| Cow position: | chr29:4876138-4876303 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 225-380 |
| Cow position: | chr29:37698450-37698296 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 227-367 |
| Cow position: | chr29:5705143-5705279 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 250-381 |
| Cow position: | chr29:31800130-31799998 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 251-373 |
| Cow position: | chr29:13568089-13567968 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
Show alignments to all cow chromosomes.