Cow genome map

Conread name: Ss1.1-Pig3-SRG8006P11.3

Conread position: 19-380
Cow position: chr7:57021522-57021157 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 254
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 28

Conread position: 33-342
Cow position: chr7:48094678-48094990 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 63

Conread position: 49-330
Cow position: chr7:44473771-44473477 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 134

Conread position: 49-357
Cow position: chr7:59301315-59301644 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 257

Conread position: 50-378
Cow position: chr7:39638012-39637689 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 221
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 91

Conread position: 76-378
Cow position: chr7:26620013-26620314 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 10

Conread position: 76-380
Cow position: chr7:38676136-38675830 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 69, 35

Conread position: 76-389
Cow position: chr7:21600268-21600593 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 69, 37

Conread position: 77-322
Cow position: chr7:38374573-38374824 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 69, 11

Conread position: 77-362
Cow position: chr7:44077072-44077373 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 159

Conread position: 80-378
Cow position: chr7:1211621-1211914 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 68, 41

Conread position: 83-335
Cow position: chr7:24066412-24066664 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 154

Conread position: 86-378
Cow position: chr7:31112101-31112394 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 61, 25

Conread position: 87-328
Cow position: chr7:52586198-52585948 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 45

Conread position: 87-356
Cow position: chr7:13063089-13062821 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 115

Conread position: 87-376
Cow position: chr7:25295263-25295564 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 91

Conread position: 87-377
Cow position: chr7:51527434-51527738 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 58, 49

Conread position: 87-378
Cow position: chr7:6067496-6067182 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 195

Conread position: 87-378
Cow position: chr7:7556950-7557238 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 30, 109

Conread position: 87-383
Cow position: chr7:37433412-37433104 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 116

Conread position: 87-385
Cow position: chr7:54086823-54086518 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 33

Conread position: 88-362
Cow position: chr7:45963015-45962733 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 75, 159

Conread position: 88-366
Cow position: chr7:2409916-2409628 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 85

Conread position: 88-376
Cow position: chr7:62096651-62096366 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 70

Conread position: 88-392
Cow position: chr7:58793140-58793441 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 114

Conread position: 90-365
Cow position: chr7:7520759-7520480 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 92

Conread position: 92-358
Cow position: chr7:52878534-52878811 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 113

Conread position: 92-373
Cow position: chr7:36917862-36917598 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 109, 65

Conread position: 98-362
Cow position: chr7:19366700-19366966 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 123

Conread position: 98-389
Cow position: chr7:63376191-63376485 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 78

Conread position: 111-362
Cow position: chr7:53815-54085 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 65

Conread position: 114-366
Cow position: chr7:8497943-8497685 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 90

Conread position: 114-369
Cow position: chr7:9469287-9469018 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 121-378
Cow position: chr7:31116267-31116000 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 81

Conread position: 127-378
Cow position: chr7:37003555-37003802 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 148-380
Cow position: chr7:17392504-17392741 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 121

Conread position: 148-414
Cow position: chr7:63594213-63594480 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 52

Conread position: 151-362
Cow position: chr7:38080630-38080413 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 54

Conread position: 157-372
Cow position: chr7:19656287-19656078 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 24

Conread position: 157-376
Cow position: chr7:48560561-48560772 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 159-362
Cow position: chr7:8134125-8133923 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 7

Conread position: 164-384
Cow position: chr7:37439728-37439935 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 180-381
Cow position: chr7:14978438-14978641 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 47

Conread position: 203-380
Cow position: chr7:33012449-33012620 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 26

Conread position: 207-369
Cow position: chr7:19972080-19972242 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 210-381
Cow position: chr7:6535134-6534964 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 215-351
Cow position: chr7:55476726-55476593 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 219-384
Cow position: chr7:36066333-36066496 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 47

Conread position: 224-378
Cow position: chr7:15571433-15571281 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 62

Conread position: 230-378
Cow position: chr7:26951523-26951376 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 253-379
Cow position: chr7:31639761-31639883 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 254-373
Cow position: chr7:9369254-9369137 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 263-362
Cow position: chr7:13973267-13973169 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.