Cow genome map
Conread name: | Ss1.1-Pig3-SRG8006P11.3 |
Conread position: | 50-352 |
Cow position: | chr9:31262001-31261677 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 223 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 35, 115 |
Conread position: | 50-352 |
Cow position: | chr9:56511624-56511942 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 210 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 35, 259 |
Conread position: | 74-378 |
Cow position: | chr9:49745796-49746103 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 220 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 20, 131 |
Conread position: | 77-378 |
Cow position: | chr9:12382355-12382048 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 206 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 14, 148 |
Conread position: | 84-354 |
Cow position: | chr9:28331616-28331325 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 207 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 5, 228 |
Conread position: | 87-378 |
Cow position: | chr9:11362116-11361818 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 215 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 58, 24 |
Conread position: | 87-378 |
Cow position: | chr9:22711889-22711606 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 200 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 87-394 |
Cow position: | chr9:44178316-44178004 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 219 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 60, 32 |
Conread position: | 88-349 |
Cow position: | chr9:14349173-14348913 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 177 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 61, 171 |
Conread position: | 88-364 |
Cow position: | chr9:41021311-41021591 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 199 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 58, 114 |
Conread position: | 88-372 |
Cow position: | chr9:21252208-21251913 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 202 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 59, 135 |
Conread position: | 88-378 |
Cow position: | chr9:45607035-45607327 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 198 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 59, 90 |
Conread position: | 88-378 |
Cow position: | chr9:46284443-46284743 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 212 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 61, 213 |
Conread position: | 88-378 |
Cow position: | chr9:51554138-51554440 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 203 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 57, 198 |
Conread position: | 89-337 |
Cow position: | chr9:23391449-23391200 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 182 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 58, 111 |
Conread position: | 89-362 |
Cow position: | chr9:14385642-14385922 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 195 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 58, 132 |
Conread position: | 89-368 |
Cow position: | chr9:31136722-31137006 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 194 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 68, 108 |
Conread position: | 89-381 |
Cow position: | chr9:50768232-50768524 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 195 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 57, 20 |
Conread position: | 89-383 |
Cow position: | chr9:30332286-30331992 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 204 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 58, 160 |
Conread position: | 90-358 |
Cow position: | chr9:15994881-15995154 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 185 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 86, 47 |
Conread position: | 90-362 |
Cow position: | chr9:27332181-27331908 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 192 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 61, 86 |
Conread position: | 90-370 |
Cow position: | chr9:49860122-49859829 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 204 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 59, 172 |
Conread position: | 91-378 |
Cow position: | chr9:12692695-12692997 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 214 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 56, 112 |
Conread position: | 93-357 |
Cow position: | chr9:46592391-46592652 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 190 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 54, 32 |
Conread position: | 98-339 |
Cow position: | chr9:9604105-9604341 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 179 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 49, 103 |
Conread position: | 100-378 |
Cow position: | chr9:50583859-50584148 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 199 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 47, 132 |
Conread position: | 103-371 |
Cow position: | chr9:46248353-46248081 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 196 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 43, 69 |
Conread position: | 107-364 |
Cow position: | chr9:40278701-40278964 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 185 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 40, 67 |
Conread position: | 111-348 |
Cow position: | chr9:57632832-57632597 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 166 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 36, 83 |
Conread position: | 111-385 |
Cow position: | chr9:28831989-28832265 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 190 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 35, 15 |
Conread position: | 112-378 |
Cow position: | chr9:46492564-46492285 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 196 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 35, 9 |
Conread position: | 127-488 |
Cow position: | chr9:34006827-34007194 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 245 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 20, 78 |
Conread position: | 148-372 |
Cow position: | chr9:55028105-55028336 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 159 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 52, 25 |
Conread position: | 148-402 |
Cow position: | chr9:2353933-2354188 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 181 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 37, 32 |
Conread position: | 150-383 |
Cow position: | chr9:55328491-55328251 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 170 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 39, 144 |
Conread position: | 166-378 |
Cow position: | chr9:19001984-19001785 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 153 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 167-373 |
Cow position: | chr9:17721026-17721236 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 151 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 53, 166 |
Conread position: | 167-378 |
Cow position: | chr9:12334515-12334723 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 150 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 64, 48 |
Conread position: | 203-388 |
Cow position: | chr9:50193235-50193418 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 133 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 27, 21 |
Conread position: | 207-389 |
Cow position: | chr9:15020700-15020886 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 137 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 13, 69 |
Conread position: | 208-369 |
Cow position: | chr9:954675-954517 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 129 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 142, 5 |
Conread position: | 215-386 |
Cow position: | chr9:12413030-12412860 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 125 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 29, 50 |
Conread position: | 216-369 |
Cow position: | chr9:58345375-58345229 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 219-376 |
Cow position: | chr9:13301247-13301095 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 117 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 12, 67 |
Conread position: | 220-379 |
Cow position: | chr9:55004151-55004309 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 99, 39 |
Conread position: | 222-368 |
Cow position: | chr9:13012647-13012790 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 116 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 224-367 |
Cow position: | chr9:36513291-36513149 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 7, 53 |
Conread position: | 234-378 |
Cow position: | chr9:24201028-24201170 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 234-379 |
Cow position: | chr9:47710581-47710438 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 109 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 20, 62 |
Conread position: | 234-381 |
Cow position: | chr9:12449197-12449344 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 112 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 235-357 |
Cow position: | chr9:15821610-15821490 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 99 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 74, 49 |
Conread position: | 235-384 |
Cow position: | chr9:47714332-47714185 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 117 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 74, 50 |
Conread position: | 245-376 |
Cow position: | chr9:8835019-8834888 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 10, 19 |
Conread position: | 260-382 |
Cow position: | chr9:48246085-48246205 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 261-381 |
Cow position: | chr9:12992084-12992202 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 98 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 263-378 |
Cow position: | chr9:42055022-42055137 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 92 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.