Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8010N20.5 |
| Conread position: | 514-631 |
| Cow position: | chr12:23916813-23916695 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 514-635 |
| Cow position: | chr12:4182724-4182842 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 514-635 |
| Cow position: | chr12:4719914-4719794 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 54 |
| Conread position: | 514-636 |
| Cow position: | chr12:4596429-4596312 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 514-636 |
| Cow position: | chr12:10491239-10491121 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 514-636 |
| Cow position: | chr12:15938296-15938419 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 514-636 |
| Cow position: | chr12:24440782-24440666 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 514-636 |
| Cow position: | chr12:28650924-28650802 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 514-636 |
| Cow position: | chr12:40910322-40910442 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 515-635 |
| Cow position: | chr12:12637217-12637337 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 515-636 |
| Cow position: | chr12:17666269-17666147 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 515-636 |
| Cow position: | chr12:22125014-22124894 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 50 |
| Conread position: | 515-636 |
| Cow position: | chr12:27563411-27563530 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 516-631 |
| Cow position: | chr12:5714595-5714480 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 516-632 |
| Cow position: | chr12:20354941-20354821 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 516-632 |
| Cow position: | chr12:28582539-28582653 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 516-632 |
| Cow position: | chr12:30805818-30805705 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 516-635 |
| Cow position: | chr12:18766008-18766130 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 516-636 |
| Cow position: | chr12:6121328-6121206 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 516-636 |
| Cow position: | chr12:18937371-18937248 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 516-636 |
| Cow position: | chr12:30476447-30476328 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 118, 37 |
| Conread position: | 516-636 |
| Cow position: | chr12:42174382-42174267 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 516-636 |
| Cow position: | chr12:46120869-46120983 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 519-636 |
| Cow position: | chr12:38184556-38184444 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 520-631 |
| Cow position: | chr12:19258241-19258131 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 520-636 |
| Cow position: | chr12:8868914-8869030 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 520-636 |
| Cow position: | chr12:23855800-23855684 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 520-636 |
| Cow position: | chr12:34007266-34007154 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 520-636 |
| Cow position: | chr12:38511875-38511991 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 520-636 |
| Cow position: | chr12:42254629-42254514 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 520-636 |
| Cow position: | chr12:42966961-42966845 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 32 |
| Conread position: | 521-632 |
| Cow position: | chr12:17881821-17881713 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 93, 28 |
| Conread position: | 521-636 |
| Cow position: | chr12:3039471-3039353 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 521-636 |
| Cow position: | chr12:28748902-28748787 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 522-632 |
| Cow position: | chr12:7000644-7000753 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 522-636 |
| Cow position: | chr12:15050657-15050770 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 544-632 |
| Cow position: | chr12:20326713-20326625 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 76 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.