Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8010N20.5 |
| Conread position: | 508-629 |
| Cow position: | chr13:32826484-32826363 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 510-632 |
| Cow position: | chr13:46329630-46329508 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 512-631 |
| Cow position: | chr13:6153806-6153688 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 513-636 |
| Cow position: | chr13:52749495-52749379 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 514-626 |
| Cow position: | chr13:15964293-15964408 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 514-630 |
| Cow position: | chr13:13809583-13809467 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 514-631 |
| Cow position: | chr13:4420322-4420439 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-632 |
| Cow position: | chr13:20650006-20649888 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-632 |
| Cow position: | chr13:36771444-36771324 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 514-635 |
| Cow position: | chr13:10924941-10924814 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 514-635 |
| Cow position: | chr13:20562973-20563094 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-636 |
| Cow position: | chr13:322805-322684 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 514-636 |
| Cow position: | chr13:6974141-6974260 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 514-636 |
| Cow position: | chr13:8652462-8652339 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 514-636 |
| Cow position: | chr13:12546928-12546811 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 514-636 |
| Cow position: | chr13:16711607-16711726 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 514-636 |
| Cow position: | chr13:18929505-18929627 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 514-636 |
| Cow position: | chr13:18941856-18941978 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-636 |
| Cow position: | chr13:20041990-20041868 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 31, 72 |
| Conread position: | 514-636 |
| Cow position: | chr13:30026089-30026212 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 514-636 |
| Cow position: | chr13:37592966-37592843 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 514-636 |
| Cow position: | chr13:61162623-61162745 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-636 |
| Cow position: | chr13:61990355-61990237 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 515-627 |
| Cow position: | chr13:37603373-37603262 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 515-632 |
| Cow position: | chr13:13954412-13954295 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 515-636 |
| Cow position: | chr13:14771433-14771555 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 515-636 |
| Cow position: | chr13:17855353-17855472 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 515-636 |
| Cow position: | chr13:25579209-25579089 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 516-631 |
| Cow position: | chr13:43762150-43762264 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 516-632 |
| Cow position: | chr13:13176632-13176747 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 516-636 |
| Cow position: | chr13:14967236-14967118 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 516-636 |
| Cow position: | chr13:17613323-17613443 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 519-630 |
| Cow position: | chr13:57002711-57002821 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 519-632 |
| Cow position: | chr13:19178257-19178370 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 520-632 |
| Cow position: | chr13:5758356-5758245 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 520-632 |
| Cow position: | chr13:54237339-54237450 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 520-636 |
| Cow position: | chr13:1042983-1042866 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 520-636 |
| Cow position: | chr13:15621795-15621914 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 520-636 |
| Cow position: | chr13:15869109-15869222 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 520-636 |
| Cow position: | chr13:15991245-15991131 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 520-636 |
| Cow position: | chr13:25531806-25531688 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 520-636 |
| Cow position: | chr13:45725881-45725995 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 521-632 |
| Cow position: | chr13:13265793-13265903 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 521-636 |
| Cow position: | chr13:15192901-15192790 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 521-636 |
| Cow position: | chr13:16024576-16024690 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 522-636 |
| Cow position: | chr13:55947761-55947872 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 524-636 |
| Cow position: | chr13:563153-563043 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 524-636 |
| Cow position: | chr13:5091680-5091566 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.