Cow genome map
Conread name: | Ss1.1-Pig3-SRG8010N20.5 |
Conread position: | 41-290 |
Cow position: | chr16:13881383-13881135 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 183 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 180, 89 |
Conread position: | 509-630 |
Cow position: | chr16:46061299-46061179 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 99 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 34, 9 |
Conread position: | 510-632 |
Cow position: | chr16:41578236-41578115 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 94 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 510-636 |
Cow position: | chr16:11568108-11568231 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 45, 78 |
Conread position: | 511-636 |
Cow position: | chr16:23810920-23810798 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 512-636 |
Cow position: | chr16:37117083-37116959 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 96 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 513-632 |
Cow position: | chr16:36120976-36121090 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 514-631 |
Cow position: | chr16:7152165-7152281 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 96 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 514-631 |
Cow position: | chr16:7665643-7665527 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 514-631 |
Cow position: | chr16:37452608-37452725 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 101 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 29, 39 |
Conread position: | 514-631 |
Cow position: | chr16:56912708-56912826 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 97 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 514-632 |
Cow position: | chr16:39646551-39646440 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 98 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 514-633 |
Cow position: | chr16:30186651-30186532 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 97 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 514-635 |
Cow position: | chr16:16096746-16096623 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 514-636 |
Cow position: | chr16:2223391-2223516 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 102 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 514-636 |
Cow position: | chr16:4503288-4503167 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 72, 39 |
Conread position: | 514-636 |
Cow position: | chr16:4910519-4910641 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 103 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 514-636 |
Cow position: | chr16:7542295-7542172 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 514-636 |
Cow position: | chr16:8076496-8076622 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 514-636 |
Cow position: | chr16:9136187-9136062 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 103 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 514-636 |
Cow position: | chr16:10148288-10148166 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 100 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 514-636 |
Cow position: | chr16:12274076-12273954 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 514-636 |
Cow position: | chr16:13969365-13969487 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 100 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 105, 51 |
Conread position: | 514-636 |
Cow position: | chr16:18757831-18757954 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 33, 99 |
Conread position: | 514-636 |
Cow position: | chr16:29677628-29677745 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 514-636 |
Cow position: | chr16:31978180-31978299 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-636 |
Cow position: | chr16:33230082-33229961 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 514-636 |
Cow position: | chr16:38243655-38243776 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 514-636 |
Cow position: | chr16:42253552-42253680 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 514-636 |
Cow position: | chr16:43308554-43308676 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 37, 44 |
Conread position: | 514-636 |
Cow position: | chr16:44973500-44973381 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-636 |
Cow position: | chr16:54084042-54083921 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 100 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 514-636 |
Cow position: | chr16:56522464-56522586 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 103, 51 |
Conread position: | 515-627 |
Cow position: | chr16:2417584-2417695 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 89 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 515-630 |
Cow position: | chr16:13578856-13578970 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 97 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 515-630 |
Cow position: | chr16:33267720-33267608 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 92 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 515-632 |
Cow position: | chr16:11102816-11102933 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 515-632 |
Cow position: | chr16:44744128-44744244 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 515-632 |
Cow position: | chr16:50521482-50521367 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 515-636 |
Cow position: | chr16:4902593-4902472 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 95 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 26, 48 |
Conread position: | 515-636 |
Cow position: | chr16:8448643-8448760 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 515-636 |
Cow position: | chr16:10032644-10032525 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 515-636 |
Cow position: | chr16:10039839-10039953 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 99 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 515-636 |
Cow position: | chr16:27020076-27019960 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 515-636 |
Cow position: | chr16:42734006-42734129 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 100 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 34, 99 |
Conread position: | 515-636 |
Cow position: | chr16:45609992-45609876 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 516-632 |
Cow position: | chr16:14242375-14242261 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 92 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 516-632 |
Cow position: | chr16:39417116-39417228 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 97 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 516-632 |
Cow position: | chr16:47620383-47620270 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 516-632 |
Cow position: | chr16:54226593-54226709 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 516-636 |
Cow position: | chr16:13791521-13791403 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 96 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 516-636 |
Cow position: | chr16:16402319-16402438 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 85, 30 |
Conread position: | 519-636 |
Cow position: | chr16:18052333-18052216 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 45, 38 |
Conread position: | 520-630 |
Cow position: | chr16:8933425-8933532 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 520-631 |
Cow position: | chr16:13232949-13233058 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 520-631 |
Cow position: | chr16:43800917-43801028 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 35, 9 |
Conread position: | 520-632 |
Cow position: | chr16:820250-820138 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 90 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 520-632 |
Cow position: | chr16:7549968-7549857 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 520-632 |
Cow position: | chr16:20025444-20025336 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 520-632 |
Cow position: | chr16:26068932-26068821 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 94 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 24, 33 |
Conread position: | 520-632 |
Cow position: | chr16:43105515-43105623 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 520-635 |
Cow position: | chr16:33869765-33869874 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 94 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 520-635 |
Cow position: | chr16:56796666-56796779 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 97 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 520-636 |
Cow position: | chr16:3246205-3246319 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 520-636 |
Cow position: | chr16:3614747-3614631 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 520-636 |
Cow position: | chr16:9790631-9790745 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 96 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 520-636 |
Cow position: | chr16:11008345-11008229 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 90 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 520-636 |
Cow position: | chr16:14758738-14758619 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 97 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 520-636 |
Cow position: | chr16:21905163-21905051 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 520-636 |
Cow position: | chr16:30135893-30136008 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 91 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 520-636 |
Cow position: | chr16:30614980-30615094 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 520-636 |
Cow position: | chr16:31159572-31159686 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 520-636 |
Cow position: | chr16:38663710-38663822 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 96 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 520-636 |
Cow position: | chr16:42340196-42340081 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 98 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 28, 34 |
Conread position: | 520-636 |
Cow position: | chr16:49125529-49125643 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 520-636 |
Cow position: | chr16:49169381-49169500 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 520-636 |
Cow position: | chr16:53627428-53627542 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 92 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 520-636 |
Cow position: | chr16:54664800-54664914 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 92 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 521-635 |
Cow position: | chr16:48145400-48145516 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 95 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 35, 27 |
Conread position: | 521-636 |
Cow position: | chr16:19047435-19047550 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 97 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 21, 37 |
Conread position: | 521-636 |
Cow position: | chr16:32069494-32069604 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 521-636 |
Cow position: | chr16:35188252-35188140 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 97 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 521-636 |
Cow position: | chr16:37380269-37380154 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 91 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 522-636 |
Cow position: | chr16:15808973-15808860 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 91 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 524-635 |
Cow position: | chr16:7082732-7082847 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 95 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 525-636 |
Cow position: | chr16:26501153-26501041 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 544-636 |
Cow position: | chr16:11775072-11775163 (view UCSC Genome Browser custom track) |
Alignm length: | 93 |
Alignm identity: | 80 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 546-636 |
Cow position: | chr16:54734221-54734131 (view UCSC Genome Browser custom track) |
Alignm length: | 91 |
Alignm identity: | 79 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.